RNA id: AMCG00019854



Basic Information


Item Value
RNA id AMCG00019854
length 249
RNA type mRNA
GC content 0.58
exon number 2
gene id AMCG00019854
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 49584196 ~ 49588350 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTCCCTCTGGTGACCATCCAAGGGGAGCAAGCTGAACCCAATCAAACGCATCGGATCTGTAAAATGAATCGAACTGCTGCCCCTCGCTATTGCGCAAACTCCGTACAACCCCCCTCCCGGCCCCTGTCCCAGGCTGCACCGCGGCATCGTCTGCTGCCTGTCGGCCATGTTGAGGTGATCTTCGGGAACCGCTGgagaaaaacatacacaaagacTGGCGGCTGGTCTGCAGTGGTAGCGCGCTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU47349 lncRNA downstream 106612 49477379 ~ 49477584 (-) True G37950
TU47340 lncRNA downstream 218029 49362303 ~ 49366167 (-) True G37942
TU47269 lncRNA downstream 716710 48867165 ~ 48867486 (-) True G37874
TU47230 lncRNA downstream 895283 48678176 ~ 48688913 (-) True G37836
TU47206 lncRNA downstream 1035015 48543643 ~ 48549181 (-) True G37815
TU47412 lncRNA upstream 184154 49772504 ~ 49772734 (-) True G38007
TU47421 lncRNA upstream 299579 49887929 ~ 49888191 (-) True G38016
TU47457 lncRNA upstream 786137 50374487 ~ 50374712 (-) True G38045
TU47468 lncRNA upstream 898030 50486380 ~ 50489297 (-) True G38053
TU47537 lncRNA upstream 1007846 50596196 ~ 50682349 (-) False AMCG00019865
AMCG00019853 mRNA downstream 55 49541400 ~ 49584141 (-) True AMCG00019853
AMCG00019851 mRNA downstream 208571 49366972 ~ 49375625 (-) True AMCG00019851
AMCG00019850 mRNA downstream 277258 49296010 ~ 49306938 (-) True AMCG00019850
AMCG00019847 mRNA downstream 315946 49224898 ~ 49268250 (-) True AMCG00019847
AMCG00019846 mRNA downstream 385815 49186314 ~ 49198381 (-) True AMCG00019846
AMCG00019856 mRNA upstream 60570 49648920 ~ 49652027 (-) True AMCG00019856
AMCG00019857 mRNA upstream 110888 49699238 ~ 49707383 (-) True AMCG00019857
AMCG00019859 mRNA upstream 260208 49848558 ~ 49850719 (-) True AMCG00019859
AMCG00019860 mRNA upstream 409731 49998081 ~ 50062124 (-) True AMCG00019860
AMCG00019863 mRNA upstream 756799 50345149 ~ 50351244 (-) True AMCG00019863
TU47195 other downstream 1060494 48522668 ~ 48523702 (-) True G37806
TU47064 other downstream 1682593 47892203 ~ 47901603 (-) False AMCG00019824
TU46822 other downstream 3191098 46365338 ~ 46393098 (-) True G37492
TU46596 other downstream 4674046 44896499 ~ 44910150 (-) False AMCG00019799
TU46276 other downstream 5927752 43577309 ~ 43656444 (-) False AMCG00019768
TU47554 other upstream 1122398 50710748 ~ 50712143 (-) True AMCG00019866
TU47623 other upstream 1375063 50963413 ~ 50966929 (-) True AMCG00019869

Expression Profile