RNA id: AMCG00019866


Basic Information

Item Value
RNA id AMCG00019866
length 654
RNA type mRNA
GC content 0.67
exon number 2
gene id AMCG00019866
representative False

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 50705840 ~ 50712143 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCCCTGTCCTCTCCGGGGCAGACTGCACATGGACCCGCACGCCACAACAAGCGTGCTCTCCGCGCAGGAAGTGCAGCAGCACAAACAACCCCCGCCCGACGAGCAGCCACGGCCGCGCAGACCTCGGCGGCTCTCAGGACCCGGGAAACCCACCCAGCCGAGGGGCAAGTGTCAGTCAAAGCAGCGCGGCGCACGCTGCGTCCGAGTGCGTCTCCCGTGCCAGTGTGTGCCAGAGCCGCGCAGCGCAGCGCAGTCACATGGCCGTGTTGCTGTCCTGGCGGCGCAGCAAGCCTGGCTCTGCGCACTTCCTCTTTCTAGGGCAGCGCAGATGTTGAAACCGAGTGCGGGGCTGCGCCGAGGCCGACCGACTCGGGCTCGCCTGCCTACACTCGGCCAGAAAACGTCGCTGAGTGCATTACGGCTCCATGATTGGACGGAGGAATACAATCTCGAAAGGCGATTGGCCGGGGATCCCCGAGGCCAGGCGACCGTGTTCCCGGCGTTTGGAGAAGTAAACAGGCCGAGGGCTCAGGGTTTGCAGTGCAGTGCGGTCACGGGGTCTGGCGCTGTGGTCGGTCGGAGCCCAGGCGACGCAGGCAGAGCCGCCCCTCAACCAGAGGCGCCCGGTCCGCCTTTCAGCATGTCCGCCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47537 lncRNA downstream 23491 50596196 ~ 50682349 (-) False AMCG00019865
TU47468 lncRNA downstream 216543 50486380 ~ 50489297 (-) True G38053
TU47457 lncRNA downstream 331128 50374487 ~ 50374712 (-) True G38045
TU47421 lncRNA downstream 817649 49887929 ~ 49888191 (-) True G38016
TU47412 lncRNA downstream 933106 49772504 ~ 49772734 (-) True G38007
TU47568 lncRNA upstream 37139 50748753 ~ 50749458 (-) True G38130
TU47573 lncRNA upstream 55183 50766797 ~ 50767409 (-) True G38135
TU47577 lncRNA upstream 73376 50784990 ~ 50786016 (-) True G38139
TU47586 lncRNA upstream 119019 50830633 ~ 50843640 (-) True G38145
TU47593 lncRNA upstream 134363 50845977 ~ 50850167 (-) True G38152
AMCG00019865 mRNA downstream 7677 50682329 ~ 50698163 (-) True AMCG00019865
AMCG00019862 mRNA downstream 195973 50494102 ~ 50509867 (-) True AMCG00019862
AMCG00019863 mRNA downstream 354596 50345149 ~ 50351244 (-) True AMCG00019863
AMCG00019860 mRNA downstream 643716 49998081 ~ 50062124 (-) True AMCG00019860
AMCG00019859 mRNA downstream 855121 49848558 ~ 49850719 (-) True AMCG00019859
AMCG00019871 mRNA upstream 208652 50920266 ~ 50921526 (-) True AMCG00019871
AMCG00019868 mRNA upstream 215666 50927280 ~ 50943520 (-) True AMCG00019868
AMCG00019870 mRNA upstream 234258 50945872 ~ 50952372 (-) True AMCG00019870
AMCG00019869 mRNA upstream 251806 50963420 ~ 50965530 (-) False AMCG00019869
TU47195 other downstream 2182138 48522668 ~ 48523702 (-) True G37806
TU47064 other downstream 2804237 47892203 ~ 47901603 (-) False AMCG00019824
TU46822 other downstream 4312742 46365338 ~ 46393098 (-) True G37492
TU46596 other downstream 5795690 44896499 ~ 44910150 (-) False AMCG00019799
TU46276 other downstream 7049396 43577309 ~ 43656444 (-) False AMCG00019768
TU47623 other upstream 251799 50963413 ~ 50966929 (-) True AMCG00019869

Expression Profile