RNA id: TU47623


Basic Information

Item Value
RNA id TU47623
length 629
RNA type TUCP
GC content 0.49
exon number 3
gene id AMCG00019869
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 50963413 ~ 50966929 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGAACCGGTGGGACGAGGAAGCTGTGATTTGAAGTGTTTGGTCAAAACTCGTTGTGATTACAATCAAGGCTGACTAATAGTCTGCACTATTGGCAACTGTGGTTAGGTTTAAAAATAACCCTTTTTGTGTCTCCATAAACAGTGCTTAAACGCAGCCAAACAATAGGCCCGTGTAAAGTGACACACGGCGCGGGGTGCGGGCTCGGGCTGACATTGCTGTCGCTCCTGCCAACACATGGGCTCGGCCTGGAGGGAGGAGGGAAAAGCTCAGTCACAAGGAAGCGCCGGCTCTGAAGTAAAAGTGAAATTGGACACAGGCTTAGTGTCGACGTGCAATCAGTGGTTCGCCGGATCCGCTGCCTCGTCTACCCACGTAGCGATGTCGTTCAAGAGTAACACCAATCTGCAGAAAGCGATAAACATTGCCAGCAAAGCCTCTGAGGAAGACAATGCAGAGAACTATGAGGAGGCTATCCGCTTATACCAGCATGCTGTTGGGATCTTCCTACACATAGTCAAACGTGAACCACAGGGGAAAGAAGGCAACCAGAAAATCAGAGAGAAGTGTGCAGAGTACCTGGACAGAGTCGAACACCTCAGAGAATACTTAGAAAACAAAGAGGTTTctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47593 lncRNA downstream 113246 50845977 ~ 50850167 (-) True G38152
TU47594 lncRNA downstream 113587 50845977 ~ 50849826 (-) False G38152
TU47586 lncRNA downstream 119773 50830633 ~ 50843640 (-) True G38145
TU47577 lncRNA downstream 177397 50784990 ~ 50786016 (-) True G38139
TU47573 lncRNA downstream 196004 50766797 ~ 50767409 (-) True G38135
AMCG00019870 mRNA downstream 11041 50945872 ~ 50952372 (-) True AMCG00019870
AMCG00019868 mRNA downstream 19893 50927280 ~ 50943520 (-) True AMCG00019868
AMCG00019871 mRNA downstream 41887 50920266 ~ 50921526 (-) True AMCG00019871
AMCG00019866 mRNA downstream 251799 50705840 ~ 50711614 (-) False AMCG00019866
AMCG00019865 mRNA downstream 265250 50682329 ~ 50698163 (-) True AMCG00019865
TU47554 other downstream 251270 50710748 ~ 50712143 (-) True AMCG00019866
TU47195 other downstream 2439711 48522668 ~ 48523702 (-) True G37806
TU47064 other downstream 3061810 47892203 ~ 47901603 (-) False AMCG00019824
TU46822 other downstream 4570315 46365338 ~ 46393098 (-) True G37492
TU46596 other downstream 6053263 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile