RNA id: AMCG00019871


Basic Information

Item Value
RNA id AMCG00019871
length 789
RNA type mRNA
GC content 0.66
exon number 2
gene id AMCG00019871
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 50920266 ~ 50921526 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCCATGGCACAGCGCGAGAGCCTGTACGACAGCCGCAGTATCGTGACTAAATACCTGCACCACAAACTGCTCAAGAGGGGCTACGTGTGGGAGAGCCATGTGTCCGGGGAGCCCGACTCTCCCAACAACGGCTTAGCGGGCTCCTCCCCCTCCAGACCCCCGGCTCTGGCGCGGCGCTCGCAGGCtgcgggagagggagaggacggCACCCCTTCGGCGCCCCAGCCGGGCCGGACCCGCCGAGCCGACCCGCACGTCGACCTGCACCGGGTTCTGCGGGAGGCCGGGGACGAGATCGAAAGGATGTACCAGCGGGACTTCGCGGAGATGTCCGACCAGCTGCACTTCACCCCGAGCACGGCGCAGCGGCGCTTCACCGCGGTGGTGGAGGAGCTGTTCCGGGACGGGGTGAACTGGGGCCGCATTGTGGCCTTCTTCGAGTTCGGGGGCACCATGTGCGTGGAGAGCGTCAACCGGGAGATGGCCTCGCAGGTGGATTACATCGCCAACTGGATGACGGAGTATCTGAACGGACCCCTGCAGAACTGGATCACGGAGAATGGAGGCTGGTGGGGTCACCTGTCCAATGCGAGTGCGCGGACCAATGAGGCTGCGCTCCCCGCCACACCCCCGCCACGCCCCCATCACAACCCAGGCACACCCCCGATACGCCCCCgtcacaacacagacacaccccgAAACGCCCCCGTCACACCCCCGACATGCCCCCGTCACGCCCACGACCGCTGCGAGTCAGCTGTCAATTTCAGACGCATCAGCAGGTGA

Function

GO:

id name namespace
GO:2001243 negative regulation of intrinsic apoptotic signaling pathway biological_process
GO:0043066 negative regulation of apoptotic process biological_process
GO:0097192 extrinsic apoptotic signaling pathway in absence of ligand biological_process
GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage biological_process
GO:0005741 mitochondrial outer membrane cellular_component
GO:0042803 protein homodimerization activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K02161 BCL2; apoptosis regulator Bcl-2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47593 lncRNA downstream 70099 50845977 ~ 50850167 (-) True G38152
TU47594 lncRNA downstream 70440 50845977 ~ 50849826 (-) False G38152
TU47586 lncRNA downstream 76626 50830633 ~ 50843640 (-) True G38145
TU47577 lncRNA downstream 134250 50784990 ~ 50786016 (-) True G38139
TU47573 lncRNA downstream 152857 50766797 ~ 50767409 (-) True G38135
AMCG00019866 mRNA downstream 208652 50705840 ~ 50711614 (-) False AMCG00019866
AMCG00019865 mRNA downstream 222103 50682329 ~ 50698163 (-) True AMCG00019865
AMCG00019862 mRNA downstream 410399 50494102 ~ 50509867 (-) True AMCG00019862
AMCG00019863 mRNA downstream 569022 50345149 ~ 50351244 (-) True AMCG00019863
AMCG00019860 mRNA downstream 858142 49998081 ~ 50062124 (-) True AMCG00019860
AMCG00019868 mRNA upstream 5754 50927280 ~ 50943520 (-) True AMCG00019868
AMCG00019870 mRNA upstream 24346 50945872 ~ 50952372 (-) True AMCG00019870
AMCG00019869 mRNA upstream 41894 50963420 ~ 50965530 (-) False AMCG00019869
TU47554 other downstream 208123 50710748 ~ 50712143 (-) True AMCG00019866
TU47195 other downstream 2396564 48522668 ~ 48523702 (-) True G37806
TU47064 other downstream 3018663 47892203 ~ 47901603 (-) False AMCG00019824
TU46822 other downstream 4527168 46365338 ~ 46393098 (-) True G37492
TU46596 other downstream 6010116 44896499 ~ 44910150 (-) False AMCG00019799
TU47623 other upstream 41887 50963413 ~ 50966929 (-) True AMCG00019869

Expression Profile