RNA id: TU39861



Basic Information


Item Value
RNA id TU39861
length 206
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G31845
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 5964264 ~ 5986796 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gGTCTCGTCCTCATATTCAAATTGCGTCATTCAAAGAGAGCAGGAAGAATGCATGGAGAAGATCAAACGAGAAGAATCCATTAATGATCCTTTAATAGGGTGTCCGAGATCGTGGGATAATATCACCTGCTGGCAGCCTGCTATGATTGGAGAAGTGGTTGTTGTCCACTGCCCACCATTATTTCAAATCATCAACTCTGAGGATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU39839 lncRNA downstream 36671 5923714 ~ 5927593 (-) True G31833
TU39837 lncRNA downstream 61627 5902372 ~ 5902637 (-) True G31831
TU39835 lncRNA downstream 146831 5817076 ~ 5817433 (-) True G31829
TU39831 lncRNA downstream 161349 5784768 ~ 5802915 (-) True G31826
TU39830 lncRNA downstream 212178 5749887 ~ 5752086 (-) True G31825
TU39892 lncRNA upstream 177193 6163989 ~ 6164537 (-) True G31875
TU39895 lncRNA upstream 275841 6262637 ~ 6262838 (-) True G31878
TU39899 lncRNA upstream 277895 6264691 ~ 6265136 (-) True G31882
TU39965 lncRNA upstream 693829 6680625 ~ 6684051 (-) False AMCG00019165
TU39967 lncRNA upstream 700707 6687503 ~ 6687816 (-) True G31931
AMCG00019153 mRNA downstream 2117 5947889 ~ 5962147 (-) True AMCG00019153
AMCG00019152 mRNA downstream 190567 5755405 ~ 5773697 (-) True AMCG00019152
AMCG00019150 mRNA downstream 292278 5635702 ~ 5671986 (-) True AMCG00019150
AMCG00019149 mRNA downstream 375922 5582228 ~ 5588342 (-) True AMCG00019149
AMCG00019145 mRNA downstream 528144 5419981 ~ 5436120 (-) True AMCG00019145
AMCG00019155 mRNA upstream 139397 6126193 ~ 6145464 (-) True AMCG00019155
AMCG00019158 mRNA upstream 171069 6157865 ~ 6161502 (-) True AMCG00019158
AMCG00019157 mRNA upstream 178387 6165183 ~ 6191211 (-) True AMCG00019157
AMCG00019161 mRNA upstream 447716 6434512 ~ 6451611 (-) True AMCG00019161
AMCG00019166 mRNA upstream 628854 6615650 ~ 6632844 (-) True AMCG00019166
TU39603 other downstream 1028268 4932838 ~ 4935996 (-) False AMCG00019129
TU38988 other downstream 3785614 2177980 ~ 2178650 (-) True G31130
TU38924 other downstream 3880993 1955668 ~ 2083271 (-) True G31082
TU38923 other downstream 3880993 2038647 ~ 2083271 (-) False G31082
TU38861 other downstream 4253721 1705899 ~ 1710543 (-) False G31035
TU41485 other upstream 7675320 13662116 ~ 13665230 (-) True G33106
TU41559 other upstream 8505095 14491891 ~ 14492218 (-) True G33163
TU41560 other upstream 8505095 14491891 ~ 14558290 (-) False G33163
TU41680 other upstream 8965046 14951842 ~ 14991996 (-) True G33259
TU41832 other upstream 9705686 15692482 ~ 15721452 (-) True G33381

Expression Profile