Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU40426 |
| length | 1240 |
| RNA type | TUCP |
| GC content | 0.48 |
| exon number | 11 |
| gene id | G32286 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 9261374 ~ 9539211 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0055004 | atrial cardiac myofibril assembly | biological_process |
| GO:0055014 | atrial cardiac muscle cell development | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU40402 | lncRNA | upstream | 38865 | 9163643 ~ 9222509 (+) | True | G32268 |
| TU40344 | lncRNA | upstream | 327628 | 8895239 ~ 8933746 (+) | True | G32235 |
| TU40198 | lncRNA | upstream | 914081 | 8345455 ~ 8347293 (+) | False | G32130 |
| TU40173 | lncRNA | upstream | 1089513 | 8171645 ~ 8171861 (+) | True | G32113 |
| TU40100 | lncRNA | upstream | 1640562 | 7620504 ~ 7620812 (+) | True | G32048 |
| TU40474 | lncRNA | downstream | 154058 | 9693269 ~ 9750270 (+) | True | G32321 |
| TU40479 | lncRNA | downstream | 178811 | 9718022 ~ 9718564 (+) | True | G32324 |
| TU40482 | lncRNA | downstream | 179828 | 9719039 ~ 9726753 (+) | True | G32325 |
| TU40475 | lncRNA | downstream | 203036 | 9742247 ~ 9750270 (+) | False | G32321 |
| TU40581 | lncRNA | downstream | 270673 | 9809884 ~ 9812637 (+) | True | G32418 |
| AMCG00019206 | mRNA | upstream | 205518 | 9046918 ~ 9055856 (+) | True | AMCG00019206 |
| AMCG00019205 | mRNA | upstream | 476435 | 8781781 ~ 8784939 (+) | True | AMCG00019205 |
| AMCG00019202 | mRNA | upstream | 655254 | 8577925 ~ 8606120 (+) | True | AMCG00019202 |
| AMCG00019200 | mRNA | upstream | 720069 | 8540613 ~ 8541305 (+) | True | AMCG00019200 |
| AMCG00019201 | mRNA | upstream | 739520 | 8497875 ~ 8521854 (+) | True | AMCG00019201 |
| AMCG00019217 | mRNA | downstream | 87199 | 9626410 ~ 9628658 (+) | True | AMCG00019217 |
| AMCG00019218 | mRNA | downstream | 115115 | 9654326 ~ 9663886 (+) | True | AMCG00019218 |
| AMCG00019219 | mRNA | downstream | 138449 | 9677660 ~ 9714621 (+) | True | AMCG00019219 |
| AMCG00019227 | mRNA | downstream | 192979 | 9732190 ~ 9745637 (+) | True | AMCG00019227 |
| AMCG00019222 | mRNA | downstream | 249150 | 9788361 ~ 9792594 (+) | True | AMCG00019222 |
| TU40197 | other | upstream | 876782 | 8345455 ~ 8384592 (+) | False | G32130 |
| TU40199 | other | upstream | 876782 | 8345455 ~ 8384592 (+) | True | G32130 |
| TU40051 | other | upstream | 1840291 | 7420501 ~ 7421083 (+) | True | G32005 |
| TU39314 | other | upstream | 6050691 | 3203787 ~ 3210683 (+) | False | AMCG00019100 |
| TU39316 | other | upstream | 6050691 | 3203787 ~ 3210683 (+) | False | AMCG00019100 |
| TU40734 | other | downstream | 865428 | 10404639 ~ 10409497 (+) | True | G32539 |
| TU41554 | other | downstream | 4900042 | 14439253 ~ 14486706 (+) | True | G33159 |
| TU41707 | other | downstream | 5625137 | 15164348 ~ 15169841 (+) | True | G33283 |
| TU41862 | other | downstream | 6504731 | 16043942 ~ 16081943 (+) | True | G33406 |
| TU42780 | other | downstream | 11068263 | 20607474 ~ 20610889 (+) | False | G34170 |
