RNA id: TU40936



Basic Information


Item Value
RNA id TU40936
length 477
lncRNA type inter_gene
GC content 0.29
exon number 2
gene id G32674
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 11632358 ~ 11637880 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tatatgtgtgtgtgtatatatatatatatatagacatgcaTAGATATGTTATATTAATGTAATCACATGCACATACCAAATGTGTACTGTATGTGAAGCAATAGTCTCcattgtggaaaataaaataaattctgcagTGTATAAGTACGGagagcacacagcacagtgcttTAGTATAACCTgtctttaaatttgaaaaagCCAATGTGTACAATTTTCATgtgatgcatacattttaaaggtaaGCTTTTAGTTATCCCTTCCCGTTTTAAAATGACcttttgttgcatttaaaacCATTCTTTTCATAAATATAGCAAGCTGCGAGCTGTACATTGAGATacttaacatttaaattctGGTACAGCaagttttatgtatttgaataagTTGGCATGTTCtaagacttatttttttgtggtaTTTATAACTTGTGGCATTCTTTAACTAATGAAGTGCAAAtaaaattttatattt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU40925 lncRNA upstream 184107 11377956 ~ 11448251 (+) True G32671
TU40745 lncRNA upstream 1124295 10463163 ~ 10508063 (+) True G32549
TU40671 lncRNA upstream 1523208 10108906 ~ 10109150 (+) True G32490
TU40608 lncRNA upstream 1712322 9917320 ~ 9920036 (+) True G32437
TU40581 lncRNA upstream 1819721 9809884 ~ 9812637 (+) True G32418
TU41061 lncRNA downstream 363083 12000963 ~ 12001164 (+) True G32778
TU41211 lncRNA downstream 971521 12609401 ~ 12612533 (+) True G32892
TU41212 lncRNA downstream 975405 12613285 ~ 12613926 (+) True G32893
TU41445 lncRNA downstream 1673534 13311414 ~ 13311742 (+) True G33075
TU41465 lncRNA downstream 1995822 13633702 ~ 13638171 (+) True G33093
AMCG00019265 mRNA upstream 20283 11607016 ~ 11612075 (+) True AMCG00019265
AMCG00019263 mRNA upstream 32545 11585793 ~ 11599813 (+) True AMCG00019263
AMCG00019264 mRNA upstream 64961 11554220 ~ 11567397 (+) True AMCG00019264
AMCG00019262 mRNA upstream 96987 11525199 ~ 11535371 (+) True AMCG00019262
AMCG00019261 mRNA upstream 155070 11472122 ~ 11477288 (+) True AMCG00019261
AMCG00019267 mRNA downstream 2628 11640508 ~ 11648448 (+) True AMCG00019267
AMCG00019260 mRNA downstream 32015 11669895 ~ 11697021 (+) True AMCG00019260
AMCG00019271 mRNA downstream 142521 11780401 ~ 11785241 (+) True AMCG00019271
AMCG00019269 mRNA downstream 183143 11821023 ~ 11838760 (+) True AMCG00019269
AMCG00019270 mRNA downstream 203263 11841143 ~ 11853279 (+) True AMCG00019270
TU40734 other upstream 1222861 10404639 ~ 10409497 (+) True G32539
TU40438 other upstream 2003696 9369898 ~ 9628662 (+) True G32293
TU40426 other upstream 2093147 9261374 ~ 9539211 (+) True G32286
TU40432 other upstream 2283539 9329479 ~ 9348819 (+) True AMCG00019215
TU40199 other upstream 3247766 8345455 ~ 8384592 (+) True G32130
TU41554 other downstream 2801373 14439253 ~ 14486706 (+) True G33159
TU41707 other downstream 3526468 15164348 ~ 15169841 (+) True G33283
TU41862 other downstream 4406062 16043942 ~ 16081943 (+) True G33406
TU42780 other downstream 8969594 20607474 ~ 20610889 (+) False G34170
TU42783 other downstream 8969594 20607474 ~ 20610889 (+) True G34170

Expression Profile