RNA id: TU41061



Basic Information


Item Value
RNA id TU41061
length 202
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G32778
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 12000963 ~ 12001164 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ctggcacctccctacctaaaagatctccttatcgaatacactccaggtcggccattgagatcacaggaagccggttacttagcgctccctaaaatacacaagaaaagcgcaggtggtagagcattcagttatagggccccgaagctgtggaacgatcttccagccaatgtaagagatgccccctctgtcttagcctttaaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU40936 lncRNA upstream 363083 11632358 ~ 11637880 (+) True G32674
TU40937 lncRNA upstream 363083 11632358 ~ 11637880 (+) False G32674
TU40925 lncRNA upstream 552712 11377956 ~ 11448251 (+) True G32671
TU40745 lncRNA upstream 1492900 10463163 ~ 10508063 (+) True G32549
TU40671 lncRNA upstream 1891813 10108906 ~ 10109150 (+) True G32490
TU41211 lncRNA downstream 608237 12609401 ~ 12612533 (+) True G32892
TU41212 lncRNA downstream 612121 12613285 ~ 12613926 (+) True G32893
TU41445 lncRNA downstream 1310250 13311414 ~ 13311742 (+) True G33075
TU41465 lncRNA downstream 1632538 13633702 ~ 13638171 (+) True G33093
TU41531 lncRNA downstream 2151638 14152802 ~ 14160703 (+) True G33141
AMCG00019274 mRNA upstream 70280 11924765 ~ 11930683 (+) True AMCG00019274
AMCG00019273 mRNA upstream 99887 11888005 ~ 11901076 (+) True AMCG00019273
AMCG00019268 mRNA upstream 133953 11860876 ~ 11867010 (+) True AMCG00019268
AMCG00019270 mRNA upstream 147684 11841143 ~ 11853279 (+) True AMCG00019270
AMCG00019269 mRNA upstream 162203 11821023 ~ 11838760 (+) True AMCG00019269
AMCG00019275 mRNA downstream 61258 12062422 ~ 12067044 (+) True AMCG00019275
AMCG00019276 mRNA downstream 66437 12067601 ~ 12075103 (+) True AMCG00019276
AMCG00019285 mRNA downstream 285754 12286918 ~ 12287709 (+) True AMCG00019285
AMCG00019281 mRNA downstream 323107 12324271 ~ 12325838 (+) True AMCG00019281
AMCG00019282 mRNA downstream 406214 12407378 ~ 12412273 (+) True AMCG00019282
TU40734 other upstream 1591466 10404639 ~ 10409497 (+) True G32539
TU40438 other upstream 2372301 9369898 ~ 9628662 (+) True G32293
TU40426 other upstream 2461752 9261374 ~ 9539211 (+) True G32286
TU40432 other upstream 2652144 9329479 ~ 9348819 (+) True AMCG00019215
TU40199 other upstream 3616371 8345455 ~ 8384592 (+) True G32130
TU41554 other downstream 2438089 14439253 ~ 14486706 (+) True G33159
TU41707 other downstream 3163184 15164348 ~ 15169841 (+) True G33283
TU41862 other downstream 4042778 16043942 ~ 16081943 (+) True G33406
TU42780 other downstream 8606310 20607474 ~ 20610889 (+) False G34170
TU42783 other downstream 8606310 20607474 ~ 20610889 (+) True G34170

Expression Profile