RNA id: TU41464


Basic Information

Item Value
RNA id TU41464
length 217
lncRNA type intronic
GC content 0.34
exon number 1
gene id G33092
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 13633286 ~ 13633502 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGGATTCTtcaagtttttttcccccttagtGTTGGCATAAATTAGTACTACTTGTGTATGAAAAATAcgttttaaatttttttagcccgagttaaaaaaactaaattggaaGGCACTGCGATATCTCCCAGAGATTATATGCTTTCAGATCCAATACATATGGGGTTTATTTGTAACCCATCTGTGCATATCTTGTTTCTGTAGCTAATTACGTGTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU41446 lncRNA downstream 321486 13311503 ~ 13311800 (-) True G33076
TU41440 lncRNA downstream 375973 13255363 ~ 13257313 (-) True G33070
TU41434 lncRNA downstream 461440 13168436 ~ 13171846 (-) False AMCG00019312
TU41374 lncRNA downstream 527036 13103953 ~ 13106250 (-) True G33030
TU41149 lncRNA downstream 1179659 12452597 ~ 12453627 (-) True G32844
TU41521 lncRNA upstream 448213 14081715 ~ 14081918 (-) True G33132
TU41616 lncRNA upstream 1059203 14692705 ~ 14698412 (-) True G33204
TU41618 lncRNA upstream 1081289 14714791 ~ 14718233 (-) True G33206
TU41689 lncRNA upstream 1428272 15061774 ~ 15062351 (-) True G33268
TU41706 lncRNA upstream 1528210 15161712 ~ 15161967 (-) True G33282
AMCG00019313 mRNA downstream 96177 13482192 ~ 13537109 (-) True AMCG00019313
AMCG00019310 mRNA downstream 161964 13457039 ~ 13471322 (-) True AMCG00019310
AMCG00019311 mRNA downstream 425019 13204424 ~ 13208267 (-) True AMCG00019311
AMCG00019312 mRNA downstream 444994 13169872 ~ 13188292 (-) True AMCG00019312
AMCG00019301 mRNA downstream 615262 13008762 ~ 13018024 (-) True AMCG00019301
AMCG00019318 mRNA upstream 100463 13733965 ~ 13739371 (-) True AMCG00019318
AMCG00019317 mRNA upstream 116352 13749854 ~ 13758818 (-) True AMCG00019317
AMCG00019319 mRNA upstream 183855 13817357 ~ 13824628 (-) True AMCG00019319
AMCG00019320 mRNA upstream 519215 14152717 ~ 14179714 (-) True AMCG00019320
AMCG00019327 mRNA upstream 983417 14616919 ~ 14638232 (-) True AMCG00019327
TU39603 other downstream 8697290 4932838 ~ 4935996 (-) False AMCG00019129
TU38988 other downstream 11454636 2177980 ~ 2178650 (-) True G31130
TU38924 other downstream 11550015 1955668 ~ 2083271 (-) True G31082
TU38923 other downstream 11550015 2038647 ~ 2083271 (-) False G31082
TU38861 other downstream 11922743 1705899 ~ 1710543 (-) False G31035
TU41485 other upstream 28614 13662116 ~ 13665230 (-) True G33106
TU41559 other upstream 858389 14491891 ~ 14492218 (-) True G33163
TU41560 other upstream 858389 14491891 ~ 14558290 (-) False G33163
TU41680 other upstream 1318340 14951842 ~ 14991996 (-) True G33259
TU41832 other upstream 2058980 15692482 ~ 15721452 (-) True G33381

Expression Profile