RNA id: TU41710



Basic Information


Item Value
RNA id TU41710
length 283
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G33285
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 15182780 ~ 15184537 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atgcagtgcaTTTCGTGCGGGCTGTAACTGTAACTTGTTTCCCTGCAGTAAGCTGGGCTTGTTGCCTGGACACCAGCCGACACAGTGCACCGGCCGTGCATCGCAGGGAATACACCAATGCGTGCACCAAGCCAGAAGTGCATGATTGcatgaaaatatactttaaacaaataatacaaagagCGGAAACTTTCTAGTTGCTGAATACATTACATGACGGAAAATGCCTGAAGTTGAACTGCTCAGATTTTCTTCAAAGGAAGGTGACCCTCAATTTCAAGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU41706 lncRNA downstream 20813 15161712 ~ 15161967 (-) True G33282
TU41689 lncRNA downstream 120429 15061774 ~ 15062351 (-) True G33268
TU41618 lncRNA downstream 464547 14714791 ~ 14718233 (-) True G33206
TU41616 lncRNA downstream 484368 14692705 ~ 14698412 (-) True G33204
TU41521 lncRNA downstream 1100862 14081715 ~ 14081918 (-) True G33132
TU41716 lncRNA upstream 69495 15254032 ~ 15256023 (-) True G33291
TU41846 lncRNA upstream 673640 15858177 ~ 15931208 (-) False G33393
TU41848 lncRNA upstream 743908 15928445 ~ 15931208 (-) True G33393
TU41877 lncRNA upstream 1087530 16272067 ~ 16311866 (-) True G33419
TU41928 lncRNA upstream 1433765 16618302 ~ 16618691 (-) True G33461
AMCG00019335 mRNA downstream 29264 15138302 ~ 15153516 (-) True AMCG00019335
AMCG00019334 mRNA downstream 151549 15030353 ~ 15031231 (-) True AMCG00019334
AMCG00019333 mRNA downstream 164714 15003452 ~ 15018066 (-) True AMCG00019333
AMCG00019332 mRNA downstream 182711 14993808 ~ 15000069 (-) True AMCG00019332
AMCG00019329 mRNA downstream 245551 14926701 ~ 14937229 (-) True AMCG00019329
AMCG00019339 mRNA upstream 121386 15305923 ~ 15314117 (-) True AMCG00019339
AMCG00019338 mRNA upstream 153134 15337671 ~ 15343274 (-) True AMCG00019338
AMCG00019341 mRNA upstream 173471 15358008 ~ 15358663 (-) True AMCG00019341
AMCG00019340 mRNA upstream 175163 15359700 ~ 15360068 (-) True AMCG00019340
AMCG00019343 mRNA upstream 348698 15533235 ~ 15551028 (-) True AMCG00019343
TU41680 other downstream 190784 14951842 ~ 14991996 (-) True G33259
TU41560 other downstream 624490 14491891 ~ 14558290 (-) False G33163
TU41559 other downstream 690562 14491891 ~ 14492218 (-) True G33163
TU41485 other downstream 1517550 13662116 ~ 13665230 (-) True G33106
TU39603 other downstream 10246784 4932838 ~ 4935996 (-) False AMCG00019129
TU41832 other upstream 507945 15692482 ~ 15721452 (-) True G33381
TU42573 other upstream 4257858 19442395 ~ 19448573 (-) True AMCG00019419
TU42823 other upstream 5558993 20743530 ~ 20765496 (-) True AMCG00019446
TU43148 other upstream 7963324 23147861 ~ 23199608 (-) True G34470
TU43838 other upstream 14333459 29517996 ~ 29521984 (-) True G35067

Expression Profile