Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU42459 |
| length | 1083 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 3 |
| gene id | G33913 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 19207194 ~ 19209710 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0001917 | photoreceptor inner segment | cellular_component |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU42419 | lncRNA | upstream | 185782 | 19012242 ~ 19021412 (+) | True | AMCG00019402 |
| TU42421 | lncRNA | upstream | 190885 | 19005024 ~ 19016309 (+) | False | AMCG00019402 |
| TU42411 | lncRNA | upstream | 279907 | 18927047 ~ 18927287 (+) | True | G33874 |
| TU42339 | lncRNA | upstream | 623490 | 18576495 ~ 18583704 (+) | True | G33812 |
| TU42335 | lncRNA | upstream | 755791 | 18451133 ~ 18451403 (+) | True | G33810 |
| TU42509 | lncRNA | downstream | 84165 | 19293875 ~ 19294208 (+) | False | AMCG00019415 |
| TU42574 | lncRNA | downstream | 241866 | 19451576 ~ 19455137 (+) | True | AMCG00019428 |
| TU42670 | lncRNA | downstream | 861626 | 20071336 ~ 20071564 (+) | True | G34084 |
| TU42673 | lncRNA | downstream | 865468 | 20075178 ~ 20078454 (+) | True | G34086 |
| TU42682 | lncRNA | downstream | 885608 | 20095318 ~ 20096450 (+) | True | G34093 |
| AMCG00019407 | mRNA | upstream | 5516 | 19191577 ~ 19201678 (+) | True | AMCG00019407 |
| AMCG00019411 | mRNA | upstream | 16881 | 19189279 ~ 19190313 (+) | True | AMCG00019411 |
| AMCG00019406 | mRNA | upstream | 87685 | 19096736 ~ 19119509 (+) | True | AMCG00019406 |
| AMCG00019408 | mRNA | upstream | 118073 | 19081719 ~ 19089121 (+) | True | AMCG00019408 |
| AMCG00019402 | mRNA | upstream | 190900 | 19006606 ~ 19016294 (+) | False | AMCG00019402 |
| AMCG00019413 | mRNA | downstream | 60099 | 19269809 ~ 19283732 (+) | True | AMCG00019413 |
| AMCG00019415 | mRNA | downstream | 75826 | 19285536 ~ 19294086 (+) | True | AMCG00019415 |
| AMCG00019414 | mRNA | downstream | 130536 | 19340246 ~ 19366528 (+) | True | AMCG00019414 |
| AMCG00019428 | mRNA | downstream | 241537 | 19451247 ~ 19454972 (+) | False | AMCG00019428 |
| AMCG00019427 | mRNA | downstream | 327124 | 19536834 ~ 19601640 (+) | True | AMCG00019427 |
| TU41862 | other | upstream | 3125251 | 16043942 ~ 16081943 (+) | True | G33406 |
| TU41707 | other | upstream | 4037353 | 15164348 ~ 15169841 (+) | True | G33283 |
| TU41554 | other | upstream | 4720488 | 14439253 ~ 14486706 (+) | True | G33159 |
| TU40734 | other | upstream | 8797697 | 10404639 ~ 10409497 (+) | True | G32539 |
| TU40438 | other | upstream | 9578532 | 9369898 ~ 9628662 (+) | True | G32293 |
| TU42780 | other | downstream | 1397764 | 20607474 ~ 20610889 (+) | False | G34170 |
| TU42783 | other | downstream | 1397764 | 20607474 ~ 20610889 (+) | True | G34170 |
| TU42785 | other | downstream | 1397764 | 20607474 ~ 20610889 (+) | False | G34170 |
| TU43058 | other | downstream | 3405913 | 22615623 ~ 22625205 (+) | False | AMCG00019475 |
| TU43194 | other | downstream | 4462415 | 23672125 ~ 23695801 (+) | True | G34511 |
