RNA id: TU44610



Basic Information


Item Value
RNA id TU44610
length 268
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G35691
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 33787518 ~ 33787785 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ggacaggtgaagtgaataacactgataatctcgttatcatggcacctgtcagtgggtgggatatattaggcagcaagtgaacattttgtcctcaaagttgatgtgttagaagcaggaaaaatgggcaagcgtaaggatctgagtgactttgacaagggccaaattgtgatggctagacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccagtctgcagtggtcagtacctatcaaaagtggtccaaggaag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU44608 lncRNA upstream 22571 33764721 ~ 33764947 (+) True G35689
TU44574 lncRNA upstream 62745 33679123 ~ 33724773 (+) True G35658
TU44549 lncRNA upstream 198931 33588383 ~ 33588587 (+) True G35636
TU44499 lncRNA upstream 402333 33384746 ~ 33385185 (+) True G35595
TU44478 lncRNA upstream 674139 33109000 ~ 33113379 (+) True G35578
TU44633 lncRNA downstream 137060 33924845 ~ 33925369 (+) True G35709
TU44740 lncRNA downstream 718273 34506058 ~ 34578440 (+) False AMCG00019638
TU44757 lncRNA downstream 808942 34596727 ~ 34596933 (+) True G35799
TU44770 lncRNA downstream 875284 34663069 ~ 34714039 (+) True G35812
TU44773 lncRNA downstream 898701 34686486 ~ 34719861 (+) True G35814
AMCG00019620 mRNA upstream 40868 33744536 ~ 33746650 (+) True AMCG00019620
AMCG00019621 mRNA upstream 82056 33694302 ~ 33705462 (+) True AMCG00019621
AMCG00019619 mRNA upstream 93293 33673551 ~ 33694225 (+) True AMCG00019619
AMCG00019614 mRNA upstream 645623 33118132 ~ 33141895 (+) True AMCG00019614
AMCG00019616 mRNA upstream 692317 33066122 ~ 33095201 (+) True AMCG00019616
AMCG00019626 mRNA downstream 11762 33799547 ~ 33845086 (+) True AMCG00019626
AMCG00019627 mRNA downstream 266818 34054603 ~ 34063226 (+) True AMCG00019627
AMCG00019632 mRNA downstream 305942 34093727 ~ 34100512 (+) True AMCG00019632
AMCG00019635 mRNA downstream 392997 34180782 ~ 34214543 (+) True AMCG00019635
AMCG00019636 mRNA downstream 431122 34218907 ~ 34308944 (+) True AMCG00019636
TU44379 other upstream 1394542 32330637 ~ 32392976 (+) False AMCG00019609
TU44375 other upstream 1460242 32324400 ~ 32327276 (+) True AMCG00019609
TU43819 other upstream 4482872 29300955 ~ 29304646 (+) False AMCG00019551
TU43194 other upstream 10091717 23672125 ~ 23695801 (+) True G34511
TU43058 other upstream 11162313 22615623 ~ 22625205 (+) False AMCG00019475
TU44804 other downstream 1052531 34840316 ~ 34851323 (+) True AMCG00019641
TU44996 other downstream 2258705 36046490 ~ 36063845 (+) False AMCG00019662
TU44999 other downstream 2258705 36046490 ~ 36063845 (+) False AMCG00019662
TU45071 other downstream 2504561 36292346 ~ 36299547 (+) True AMCG00019671
TU45249 other downstream 3726202 37513987 ~ 37516027 (+) True G36212

Expression Profile