RNA id: TU45113



Basic Information


Item Value
RNA id TU45113
length 227
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G36106
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 37060418 ~ 37060644 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AAGATGACAAATTAGATAAAGCTGTGTATACCTGGTTTGTTCAAGCATGGAATGAGGGAATTCCAATTTCAGGGGCTATATTATGTGAGAAAGCAAAGAGGTTTAATCAATTGTTGGACAGTGACTCAAACTTCAAAGCTTCATCTGGCTGGCTGAAGTGGTTTCAGAGCCATCATGGAATCAAGCAGCTCATTGTGCAGGGTGAAAAACTTTCGGCTAACACTGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45105 lncRNA upstream 113920 36946101 ~ 36946498 (+) True G36098
TU45100 lncRNA upstream 148439 36911541 ~ 36911979 (+) True G36094
TU45094 lncRNA upstream 432348 36627690 ~ 36628070 (+) True G36088
TU45051 lncRNA upstream 833069 36226038 ~ 36227349 (+) True G36054
TU45043 lncRNA upstream 851912 36205428 ~ 36208506 (+) True G36046
TU45128 lncRNA downstream 141280 37201924 ~ 37204962 (+) False AMCG00019676
TU45141 lncRNA downstream 178245 37238889 ~ 37240494 (+) True G36130
TU45218 lncRNA downstream 327684 37388328 ~ 37389962 (+) True G36189
TU45442 lncRNA downstream 1568564 38629208 ~ 38632178 (+) False AMCG00019708
TU45485 lncRNA downstream 1795195 38855839 ~ 38857856 (+) True G36370
AMCG00019671 mRNA upstream 760905 36292352 ~ 36299513 (+) False AMCG00019671
AMCG00019670 mRNA upstream 859227 36197051 ~ 36201191 (+) True AMCG00019670
AMCG00019669 mRNA upstream 869622 36187052 ~ 36190796 (+) True AMCG00019669
AMCG00019662 mRNA upstream 996568 36046477 ~ 36063850 (+) True AMCG00019662
AMCG00019660 mRNA upstream 1328160 35716345 ~ 35732258 (+) True AMCG00019660
AMCG00019677 mRNA downstream 30379 37091023 ~ 37169287 (+) True AMCG00019677
AMCG00019676 mRNA downstream 117715 37178359 ~ 37213519 (+) True AMCG00019676
AMCG00019680 mRNA downstream 305330 37365974 ~ 37371256 (+) True AMCG00019680
AMCG00019681 mRNA downstream 311735 37372379 ~ 37378679 (+) True AMCG00019681
AMCG00019689 mRNA downstream 338956 37399600 ~ 37406431 (+) True AMCG00019689
TU45071 other upstream 760871 36292346 ~ 36299547 (+) True AMCG00019671
TU44996 other upstream 996573 36046490 ~ 36063845 (+) False AMCG00019662
TU44999 other upstream 996573 36046490 ~ 36063845 (+) False AMCG00019662
TU44804 other upstream 2209095 34840316 ~ 34851323 (+) True AMCG00019641
TU44379 other upstream 4667442 32330637 ~ 32392976 (+) False AMCG00019609
TU45249 other downstream 453343 37513987 ~ 37516027 (+) True G36212
TU46002 other downstream 5495896 42556540 ~ 42558936 (+) True AMCG00019747
TU46131 other downstream 5900012 42960656 ~ 42962658 (+) True AMCG00019755
TU46165 other downstream 6201250 43261894 ~ 43270885 (+) False AMCG00019758
TU46181 other downstream 6269648 43330292 ~ 43333313 (+) True G36954

Expression Profile