RNA id: TU45387


Basic Information

Item Value
RNA id TU45387
length 215
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G36312
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 38118720 ~ 38118934 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AACAATATGATCATGTATTGAAACATAAAGGGACAAGTTCACTTATTATATGCACATGTTGCAACAATGAATGCTTAaaagtgaaaatacaaaaattaaaaaccataACGGCAGAGGGCGCAGTCGCACCACTTTACAGAGGGAACAAAGCACTTCTGCCCCACCTCGTACAGCAGCAGTGGGTCTGGAGAGACACTTCTCAGAGCCATCAATGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU45375 lncRNA downstream 8513 37987243 ~ 38110207 (-) True AMCG00019698
TU45373 lncRNA downstream 8783 37987243 ~ 38109937 (-) False AMCG00019698
TU45374 lncRNA downstream 8783 38051213 ~ 38109937 (-) False AMCG00019698
TU45377 lncRNA downstream 8783 38100553 ~ 38109937 (-) False AMCG00019698
TU45372 lncRNA downstream 8783 38100765 ~ 38109937 (-) False AMCG00019698
TU45429 lncRNA upstream 335090 38454024 ~ 38454309 (-) True G36349
TU45501 lncRNA upstream 499907 38618841 ~ 38619657 (-) True G36386
TU45585 lncRNA upstream 959569 39078503 ~ 39081979 (-) True G36456
TU45604 lncRNA upstream 1126858 39245792 ~ 39293373 (-) True G36470
TU45630 lncRNA upstream 1260874 39379808 ~ 39380708 (-) True G36495
AMCG00019698 mRNA downstream 8496 37889444 ~ 38110224 (-) False AMCG00019698
AMCG00019692 mRNA downstream 373064 37741509 ~ 37745656 (-) True AMCG00019692
AMCG00019684 mRNA downstream 528659 37565270 ~ 37590061 (-) True AMCG00019684
AMCG00019688 mRNA downstream 625851 37491236 ~ 37492869 (-) True AMCG00019688
AMCG00019686 mRNA downstream 629578 37458093 ~ 37489142 (-) True AMCG00019686
AMCG00019701 mRNA upstream 88948 38207882 ~ 38222789 (-) True AMCG00019701
AMCG00019703 mRNA upstream 143958 38262892 ~ 38263670 (-) True AMCG00019703
AMCG00019702 mRNA upstream 147420 38266354 ~ 38269323 (-) True AMCG00019702
AMCG00019704 mRNA upstream 224038 38342972 ~ 38350616 (-) True AMCG00019704
AMCG00019705 mRNA upstream 507340 38626274 ~ 38626804 (-) True AMCG00019705
TU44832 other downstream 3063276 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 3596450 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 5885322 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 8433418 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 8472757 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 4425182 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 4525390 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 5179297 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 5458375 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 6777565 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile