RNA id: TU45604



Basic Information


Item Value
RNA id TU45604
length 210
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G36470
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 39245792 ~ 39293373 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tgtgtgaagaagtgtctcctgttttctatcttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcaatgcctttcatgattttgaagacttgaatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttccctcagtctctca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45585 lncRNA downstream 163813 39078503 ~ 39081979 (-) True G36456
TU45501 lncRNA downstream 626135 38618841 ~ 38619657 (-) True G36386
TU45429 lncRNA downstream 791483 38454024 ~ 38454309 (-) True G36349
TU45387 lncRNA downstream 1126858 38118720 ~ 38118934 (-) True G36312
TU45377 lncRNA downstream 1135855 38100553 ~ 38109937 (-) False AMCG00019698
TU45630 lncRNA upstream 86435 39379808 ~ 39380708 (-) True G36495
TU45651 lncRNA upstream 123629 39417002 ~ 39417956 (-) False AMCG00019724
TU45676 lncRNA upstream 413229 39706602 ~ 39709528 (-) True G36534
TU45677 lncRNA upstream 413697 39707070 ~ 39709528 (-) False G36534
TU45684 lncRNA upstream 518937 39812310 ~ 39813571 (-) True G36539
AMCG00019720 mRNA downstream 49959 39195494 ~ 39195833 (-) True AMCG00019720
AMCG00019719 mRNA downstream 148680 39082102 ~ 39097112 (-) True AMCG00019719
AMCG00019713 mRNA downstream 256661 38980110 ~ 38989131 (-) True AMCG00019713
AMCG00019714 mRNA downstream 292779 38929405 ~ 38953013 (-) True AMCG00019714
AMCG00019715 mRNA downstream 338606 38902803 ~ 38907186 (-) True AMCG00019715
AMCG00019721 mRNA upstream 70591 39363964 ~ 39370197 (-) True AMCG00019721
AMCG00019724 mRNA upstream 123514 39416887 ~ 39505562 (-) True AMCG00019724
AMCG00019725 mRNA upstream 417614 39710987 ~ 39728290 (-) True AMCG00019725
AMCG00019727 mRNA upstream 440016 39733389 ~ 39740243 (-) True AMCG00019727
AMCG00019726 mRNA upstream 532982 39826355 ~ 39830587 (-) True AMCG00019726
TU44832 other downstream 4190348 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 4723522 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 7012394 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 9560490 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 9599829 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 3250743 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 3350951 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 4004858 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 4283936 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 5603126 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile