RNA id: TU45752



Basic Information


Item Value
RNA id TU45752
length 200
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G36598
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 40489916 ~ 40490115 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cacgggccagccttcgctccccacgtgcatcagtgagccttggccgcccatgaccctgtcgccggttcaccgcttttctttccttggaccacttttgataggtactgaccactgcagaccgggaacaccccacaagagctgcagttttggagatgctctgacccagtcatctagccatcacaatttgtcccttgtcaaag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45751 lncRNA upstream 35432 40454183 ~ 40454484 (+) True G36597
TU45742 lncRNA upstream 108492 40381223 ~ 40381424 (+) True G36588
TU45740 lncRNA upstream 120376 40369232 ~ 40369540 (+) True G36586
TU45739 lncRNA upstream 141440 40348204 ~ 40348476 (+) True G36585
TU45657 lncRNA upstream 780376 39707066 ~ 39709540 (+) True G36516
TU45755 lncRNA downstream 89773 40579888 ~ 40580095 (+) True G36601
TU45758 lncRNA downstream 156333 40646448 ~ 40646687 (+) True G36604
TU45808 lncRNA downstream 380993 40871108 ~ 40871315 (+) True G36644
TU45818 lncRNA downstream 652075 41142190 ~ 41142574 (+) True G36654
TU45864 lncRNA downstream 1239047 41729162 ~ 41729411 (+) True G36698
AMCG00019729 mRNA upstream 570895 39913982 ~ 39919021 (+) True AMCG00019729
AMCG00019730 mRNA upstream 600893 39855185 ~ 39889023 (+) True AMCG00019730
AMCG00019728 mRNA upstream 659085 39812077 ~ 39830831 (+) True AMCG00019728
AMCG00019722 mRNA upstream 1075031 39382147 ~ 39414885 (+) True AMCG00019722
AMCG00019723 mRNA upstream 1161075 39317255 ~ 39328841 (+) True AMCG00019723
AMCG00019733 mRNA downstream 201401 40691516 ~ 40702922 (+) True AMCG00019733
AMCG00019732 mRNA downstream 228368 40718483 ~ 40729666 (+) True AMCG00019732
AMCG00019737 mRNA downstream 814719 41304834 ~ 41312913 (+) True AMCG00019737
AMCG00019735 mRNA downstream 834579 41324694 ~ 41335203 (+) True AMCG00019735
AMCG00019736 mRNA downstream 858326 41348441 ~ 41358215 (+) True AMCG00019736
TU45249 other upstream 2973889 37513987 ~ 37516027 (+) True G36212
TU45071 other upstream 4190369 36292346 ~ 36299547 (+) True AMCG00019671
TU44996 other upstream 4426071 36046490 ~ 36063845 (+) False AMCG00019662
TU44999 other upstream 4426071 36046490 ~ 36063845 (+) False AMCG00019662
TU44804 other upstream 5638593 34840316 ~ 34851323 (+) True AMCG00019641
TU46002 other downstream 2066425 42556540 ~ 42558936 (+) True AMCG00019747
TU46131 other downstream 2470541 42960656 ~ 42962658 (+) True AMCG00019755
TU46165 other downstream 2771779 43261894 ~ 43270885 (+) False AMCG00019758
TU46181 other downstream 2840177 43330292 ~ 43333313 (+) True G36954
TU46357 other downstream 3562959 44053074 ~ 44056603 (+) True G37105

Expression Profile