RNA id: TU45816


Basic Information

Item Value
RNA id TU45816
length 204
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G36652
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 41010200 ~ 41010403 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

accatggcaagactgagcacagcaacaagacacaaggtagttatactgcatcagcaaggtctctcccaggcagaaatttcaaggcagacaggggtttccagatgtgctgtccaagctcttttgaagaagcacaaagaaatgggcaacgttgaggaccgtagacgcagtggtcagccaaggaaacttactgcagcagatgaaaga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU45814 lncRNA downstream 7523 41002062 ~ 41002677 (-) True G36650
TU45759 lncRNA downstream 363513 40646473 ~ 40646687 (-) True G36605
TU45744 lncRNA downstream 605617 40404251 ~ 40404583 (-) True G36590
TU45736 lncRNA downstream 674644 40335143 ~ 40335556 (-) True G36582
TU45727 lncRNA downstream 818839 40189820 ~ 40191361 (-) True G36576
TU45865 lncRNA upstream 718761 41729164 ~ 41729412 (-) True G36699
TU45876 lncRNA upstream 939710 41950113 ~ 41950329 (-) True G36710
TU45888 lncRNA upstream 1027132 42037535 ~ 42037735 (-) True G36722
TU45906 lncRNA upstream 1060659 42071062 ~ 42074667 (-) True AMCG00019741
TU45959 lncRNA upstream 1442262 42452665 ~ 42452940 (-) True G36787
AMCG00019734 mRNA downstream 244012 40729693 ~ 40766188 (-) True AMCG00019734
AMCG00019731 mRNA downstream 965909 39970175 ~ 40044291 (-) True AMCG00019731
AMCG00019726 mRNA downstream 1179613 39826355 ~ 39830587 (-) True AMCG00019726
AMCG00019727 mRNA downstream 1269957 39733389 ~ 39740243 (-) True AMCG00019727
AMCG00019725 mRNA downstream 1281910 39710987 ~ 39728290 (-) True AMCG00019725
AMCG00019738 mRNA upstream 537515 41547918 ~ 41563384 (-) True AMCG00019738
AMCG00019739 mRNA upstream 563873 41574276 ~ 41576305 (-) True AMCG00019739
AMCG00019741 mRNA upstream 1060907 42071310 ~ 42078932 (-) False AMCG00019741
AMCG00019743 mRNA upstream 1378577 42388980 ~ 42406310 (-) True AMCG00019743
AMCG00019744 mRNA upstream 1404207 42414610 ~ 42442771 (-) True AMCG00019744
TU44832 other downstream 5954756 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 6487930 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 8776802 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 11324898 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 11364237 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 1533713 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 1633921 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 2287828 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 2566906 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 3886096 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile