RNA id: TU45865



Basic Information


Item Value
RNA id TU45865
length 249
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G36699
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 41729164 ~ 41729412 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ggttctgatagaaaggtgtcagaacacacggtgcatcgcagtttgttgcgtatggggctgcgtagccgcagaccagtcagggtgcccatgctgacccctgtccactgccaaaagcgcctacaatgggcacgtgagcatcagaactggaccacggagcaatggaagaaggtggcctggtctgatgaatcacgagttcaagatgttgacttggcctccaaattccccagatctcaatccaatcgagcatct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45816 lncRNA downstream 718761 41010200 ~ 41010403 (-) True G36652
TU45814 lncRNA downstream 726487 41002062 ~ 41002677 (-) True G36650
TU45759 lncRNA downstream 1082477 40646473 ~ 40646687 (-) True G36605
TU45744 lncRNA downstream 1324581 40404251 ~ 40404583 (-) True G36590
TU45736 lncRNA downstream 1393608 40335143 ~ 40335556 (-) True G36582
TU45876 lncRNA upstream 220701 41950113 ~ 41950329 (-) True G36710
TU45888 lncRNA upstream 308123 42037535 ~ 42037735 (-) True G36722
TU45906 lncRNA upstream 341650 42071062 ~ 42074667 (-) True AMCG00019741
TU45959 lncRNA upstream 723253 42452665 ~ 42452940 (-) True G36787
TU45980 lncRNA upstream 793751 42523163 ~ 42528691 (-) True G36805
AMCG00019739 mRNA downstream 152859 41574276 ~ 41576305 (-) True AMCG00019739
AMCG00019738 mRNA downstream 165780 41547918 ~ 41563384 (-) True AMCG00019738
AMCG00019734 mRNA downstream 962976 40729693 ~ 40766188 (-) True AMCG00019734
AMCG00019731 mRNA downstream 1684873 39970175 ~ 40044291 (-) True AMCG00019731
AMCG00019726 mRNA downstream 1898577 39826355 ~ 39830587 (-) True AMCG00019726
AMCG00019741 mRNA upstream 341898 42071310 ~ 42078932 (-) False AMCG00019741
AMCG00019743 mRNA upstream 659568 42388980 ~ 42406310 (-) True AMCG00019743
AMCG00019744 mRNA upstream 685198 42414610 ~ 42442771 (-) True AMCG00019744
AMCG00019748 mRNA upstream 762652 42492064 ~ 42507976 (-) True AMCG00019748
AMCG00019749 mRNA upstream 804492 42533904 ~ 42542454 (-) True AMCG00019749
TU44832 other downstream 6673720 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 7206894 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 9495766 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 12043862 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 12083201 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 814704 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 914912 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 1568819 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 1847897 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 3167087 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile