RNA id: TU45888



Basic Information


Item Value
RNA id TU45888
length 201
lncRNA type inter_gene
GC content 0.29
exon number 1
gene id G36722
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 42037535 ~ 42037735 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tgtggttaataataataatacatacatacatgacaCAAAGCCACACAGcatcacaaaaaatatataatatattacaccTTTGGGAATAACAATGTAACGCTTTATGAAGATCGTgagaacatgaaaacaaactccCACAATGACAgctacaaacaaaaacattgtattattattatcattgtattaATATGGTCACCTTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45876 lncRNA downstream 87206 41950113 ~ 41950329 (-) True G36710
TU45865 lncRNA downstream 308123 41729164 ~ 41729412 (-) True G36699
TU45816 lncRNA downstream 1027132 41010200 ~ 41010403 (-) True G36652
TU45814 lncRNA downstream 1034858 41002062 ~ 41002677 (-) True G36650
TU45759 lncRNA downstream 1390848 40646473 ~ 40646687 (-) True G36605
TU45906 lncRNA upstream 33327 42071062 ~ 42074667 (-) True AMCG00019741
TU45959 lncRNA upstream 414930 42452665 ~ 42452940 (-) True G36787
TU45980 lncRNA upstream 485428 42523163 ~ 42528691 (-) True G36805
TU46018 lncRNA upstream 544408 42582143 ~ 42582473 (-) True G36841
TU46063 lncRNA upstream 724796 42762531 ~ 42762734 (-) True G36882
AMCG00019739 mRNA downstream 461230 41574276 ~ 41576305 (-) True AMCG00019739
AMCG00019738 mRNA downstream 474151 41547918 ~ 41563384 (-) True AMCG00019738
AMCG00019734 mRNA downstream 1271347 40729693 ~ 40766188 (-) True AMCG00019734
AMCG00019731 mRNA downstream 1993244 39970175 ~ 40044291 (-) True AMCG00019731
AMCG00019726 mRNA downstream 2206948 39826355 ~ 39830587 (-) True AMCG00019726
AMCG00019741 mRNA upstream 33575 42071310 ~ 42078932 (-) False AMCG00019741
AMCG00019743 mRNA upstream 351245 42388980 ~ 42406310 (-) True AMCG00019743
AMCG00019744 mRNA upstream 376875 42414610 ~ 42442771 (-) True AMCG00019744
AMCG00019748 mRNA upstream 454329 42492064 ~ 42507976 (-) True AMCG00019748
AMCG00019749 mRNA upstream 496169 42533904 ~ 42542454 (-) True AMCG00019749
TU44832 other downstream 6982091 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 7515265 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 9804137 32222064 ~ 32233398 (-) True G35476
TU43881 other downstream 12352233 29679229 ~ 29685302 (-) True G35101
TU43875 other downstream 12391572 29638566 ~ 29645963 (-) False AMCG00019554
TU45993 other upstream 506381 42544116 ~ 42544524 (-) True G36817
TU46040 other upstream 606589 42644324 ~ 42656393 (-) True G36862
TU46211 other upstream 1260496 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 1539574 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 2858764 44896499 ~ 44910150 (-) False AMCG00019799

Expression Profile