RNA id: TU46022



Basic Information


Item Value
RNA id TU46022
length 214
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G36845
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 42602809 ~ 42603022 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


acacagtttgagaaccactggtatAGCTAGCCTGCACTCACTGTGATATTGTGGAACATGGGCTAAGCATAGAGAGAAAGTGGGATGACCTTACTTTGCCTTTGTAGAATCCAATTGATAAGTCTTCAAGCCATAATTTGTTTCCCCTGAAGCATATGTATGACTCATATGCATCTCGGCAACTGATTTGGCGATTGAAacactcattttgttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46021 lncRNA upstream 17657 42584858 ~ 42585152 (+) True G36844
TU46019 lncRNA upstream 20051 42582520 ~ 42582758 (+) True G36842
TU45992 lncRNA upstream 58283 42544225 ~ 42544526 (+) True G36816
TU45982 lncRNA upstream 70100 42532017 ~ 42532709 (+) True G36807
TU45920 lncRNA upstream 290637 42311548 ~ 42312172 (+) True G36754
TU46031 lncRNA downstream 22203 42625225 ~ 42625818 (+) False AMCG00019751
TU46114 lncRNA downstream 265380 42868402 ~ 42868634 (+) True G36895
TU46129 lncRNA downstream 347184 42950206 ~ 42950422 (+) True G36910
TU46161 lncRNA downstream 629334 43232356 ~ 43232646 (+) True G36936
TU46232 lncRNA downstream 856424 43459446 ~ 43550548 (+) True G37000
AMCG00019747 mRNA upstream 30729 42557299 ~ 42572080 (+) False AMCG00019747
AMCG00019746 mRNA upstream 50136 42545447 ~ 42552673 (+) True AMCG00019746
AMCG00019745 mRNA upstream 75601 42508602 ~ 42527208 (+) True AMCG00019745
AMCG00019742 mRNA upstream 217161 42374468 ~ 42385648 (+) True AMCG00019742
AMCG00019740 mRNA upstream 736332 41691571 ~ 41866477 (+) True AMCG00019740
AMCG00019751 mRNA downstream 21708 42624730 ~ 42627105 (+) True AMCG00019751
AMCG00019750 mRNA downstream 51625 42654647 ~ 42662493 (+) True AMCG00019750
AMCG00019753 mRNA downstream 114911 42717933 ~ 42740339 (+) True AMCG00019753
AMCG00019755 mRNA downstream 357655 42960677 ~ 42962499 (+) False AMCG00019755
AMCG00019758 mRNA downstream 658922 43261944 ~ 43271192 (+) True AMCG00019758
TU46002 other upstream 43873 42556540 ~ 42558936 (+) True AMCG00019747
TU45249 other upstream 5086782 37513987 ~ 37516027 (+) True G36212
TU45071 other upstream 6303262 36292346 ~ 36299547 (+) True AMCG00019671
TU44996 other upstream 6538964 36046490 ~ 36063845 (+) False AMCG00019662
TU46131 other downstream 357634 42960656 ~ 42962658 (+) True AMCG00019755
TU46165 other downstream 658872 43261894 ~ 43270885 (+) False AMCG00019758
TU46181 other downstream 727270 43330292 ~ 43333313 (+) True G36954
TU46357 other downstream 1450052 44053074 ~ 44056603 (+) True G37105
TU46693 other downstream 2676433 45279455 ~ 45339619 (+) False G37372

Expression Profile