RNA id: TU46126


Basic Information

Item Value
RNA id TU46126
length 258
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G36907
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 42942242 ~ 42942499 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCAGTGACCAGCAAAGCCGCGCCGGCAGAATTATAAGGTAAGGGAGCCTTTTAAAATCCCTACTGCGGTGCTTTGCTTTCACTTGTCTGCTCGCCTGGCCCTCTGAGGATCAGGTAACGCgatctatattttaattcaacGTTGTTGCTTGCCTTACATCAAGTACTTGAGgcaggaaatgttttcttgctTGTAAAGAAACAAGGGTTTCTTAGGGGTACCATAAACTTGACTGTGTCTTCTTGTTTGTGAAGAAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46113 lncRNA downstream 93556 42848457 ~ 42848686 (-) True G36894
TU46063 lncRNA downstream 179508 42762531 ~ 42762734 (-) True G36882
TU46018 lncRNA downstream 359769 42582143 ~ 42582473 (-) True G36841
TU45980 lncRNA downstream 413551 42523163 ~ 42528691 (-) True G36805
TU45959 lncRNA downstream 489302 42452665 ~ 42452940 (-) True G36787
TU46206 lncRNA upstream 324394 43266893 ~ 43303060 (-) True G36977
TU46213 lncRNA upstream 387790 43330289 ~ 43333313 (-) True AMCG00019761
TU46265 lncRNA upstream 583908 43526407 ~ 43555509 (-) False G37022
TU46264 lncRNA upstream 608809 43551308 ~ 43555509 (-) True G37022
TU46263 lncRNA upstream 613244 43555743 ~ 43556744 (-) True G37021
AMCG00019754 mRNA downstream 226632 42695829 ~ 42715610 (-) True AMCG00019754
AMCG00019752 mRNA downstream 361858 42561569 ~ 42580384 (-) True AMCG00019752
AMCG00019749 mRNA downstream 399788 42533904 ~ 42542454 (-) True AMCG00019749
AMCG00019748 mRNA downstream 434266 42492064 ~ 42507976 (-) True AMCG00019748
AMCG00019744 mRNA downstream 499471 42414610 ~ 42442771 (-) True AMCG00019744
AMCG00019756 mRNA upstream 32869 42975368 ~ 42976338 (-) True AMCG00019756
AMCG00019757 mRNA upstream 75610 43018109 ~ 43151658 (-) True AMCG00019757
AMCG00019760 mRNA upstream 331531 43274030 ~ 43282805 (-) True AMCG00019760
AMCG00019761 mRNA upstream 389932 43332431 ~ 43342706 (-) False AMCG00019761
AMCG00019763 mRNA upstream 427397 43369896 ~ 43399130 (-) True AMCG00019763
TU46040 other downstream 285849 42644324 ~ 42656393 (-) True G36862
TU45993 other downstream 397718 42544116 ~ 42544524 (-) True G36817
TU44832 other downstream 7886798 35055019 ~ 35055444 (-) True G35867
TU44748 other downstream 8419972 34510733 ~ 34522270 (-) True AMCG00019645
TU44357 other downstream 10708844 32222064 ~ 32233398 (-) True G35476
TU46211 other upstream 355732 43298231 ~ 43360906 (-) True G36982
TU46276 other upstream 634810 43577309 ~ 43656444 (-) False AMCG00019768
TU46596 other upstream 1954000 44896499 ~ 44910150 (-) False AMCG00019799
TU46822 other upstream 3422839 46365338 ~ 46393098 (-) True G37492
TU47064 other upstream 4949704 47892203 ~ 47901603 (-) False AMCG00019824

Expression Profile