RNA id: TU46357



Basic Information


Item Value
RNA id TU46357
length 725
RNA type TUCP
GC content 0.53
exon number 4
gene id G37105
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 44053074 ~ 44056603 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATTGTTGTCCTTGTAGTTGAGGTTGATCACAAGACCGAAGGGCCGGCCGCCCATTGGCTCAGCGGGGATGAAGGAGTACTCGAAGGTGGCCTGGCGCAGGGGCGGGACCACCGTGTTCAGCTGCAGGGCCGTGAAGTTCTGGATGTAAAACTGATAGTCCTGGGGATAGCGGAATGAGGCATCCAAGGATTCCACCACAAATTCCTCGCTGCCCTTGTTGGTGAAACCAACCAGGAACTTCACAATGTTGTTGGCGGGGAAATCTTTGGCAGCAAGGTCCCCAGGGCTGGGCATCGTTGTTCTGGACTTACCCTCTCCTTTCACAAAGAGGATGGTGGTATCAGCGTTGGGGGAGGCTTTTGCTTCCCCTGAGGTTACatcctcttcttcttcatctttttCTTCCGTCAACTCTGTCGTTTCATCGTCTTCCACTTCAGCTTCGTCATCTTCATCCTCTGCGATCACATCATCCGCTGCCTCTTCATCCTCTGTTGCATCTTGCGCTGCCACGAGAGGGCCTCTGCCATTGAGGAGGATCGTCGCGGGAAACGCCAACAAGGCGATCAGGAGTAATTTCGGCAGAAAATTCATCATTTTCCCCCAAGACTTAATACACGGTTCCCGATCAGATCTCACTCTCTTCGTCTCCCTGACCCCGCGTTTCTTCAGCTTGGTAATAATGGCGTATGCTGCTCATCCGGGTATTGTGCAGCCCTTTTTCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46354 lncRNA upstream 1643 44046329 ~ 44051431 (+) True G37102
TU46318 lncRNA upstream 118755 43934103 ~ 43934319 (+) True G37070
TU46314 lncRNA upstream 138255 43914192 ~ 43914819 (+) False G37068
TU46315 lncRNA upstream 138255 43914192 ~ 43914819 (+) False G37068
TU46316 lncRNA upstream 138255 43914192 ~ 43914819 (+) True G37068
TU46393 lncRNA downstream 179611 44236214 ~ 44288369 (+) True G37132
TU46406 lncRNA downstream 272416 44329019 ~ 44334697 (+) True G37135
TU46448 lncRNA downstream 347989 44404592 ~ 44406930 (+) True G37168
TU46453 lncRNA downstream 379496 44436099 ~ 44443701 (+) False AMCG00019785
TU46484 lncRNA downstream 458365 44514968 ~ 44517929 (+) True G37199
AMCG00019773 mRNA upstream 8399 44014510 ~ 44044675 (+) True AMCG00019773
AMCG00019770 mRNA upstream 88806 43949035 ~ 43964268 (+) True AMCG00019770
AMCG00019767 mRNA upstream 347989 43702543 ~ 43705085 (+) True AMCG00019767
AMCG00019766 mRNA upstream 487035 43565086 ~ 43566039 (+) True AMCG00019766
AMCG00019764 mRNA upstream 500769 43527447 ~ 43552305 (+) True AMCG00019764
AMCG00019775 mRNA downstream 3922 44060525 ~ 44070657 (+) True AMCG00019775
AMCG00019784 mRNA downstream 209638 44266241 ~ 44269213 (+) True AMCG00019784
AMCG00019780 mRNA downstream 220248 44276851 ~ 44332148 (+) True AMCG00019780
AMCG00019781 mRNA downstream 276042 44332645 ~ 44339115 (+) True AMCG00019781
AMCG00019785 mRNA downstream 379319 44435922 ~ 44443756 (+) True AMCG00019785
TU46181 other upstream 719761 43330292 ~ 43333313 (+) True G36954
TU46165 other upstream 782189 43261894 ~ 43270885 (+) False AMCG00019758
TU46131 other upstream 1090416 42960656 ~ 42962658 (+) True AMCG00019755
TU46002 other upstream 1494138 42556540 ~ 42558936 (+) True AMCG00019747
TU45249 other upstream 6537047 37513987 ~ 37516027 (+) True G36212
TU46693 other downstream 1222852 45279455 ~ 45339619 (+) False G37372
TU46904 other downstream 2734424 46791027 ~ 46791485 (+) True G37561
TU47161 other downstream 4394025 48450628 ~ 48451167 (+) True G37779
TU47362 other downstream 5501879 49558482 ~ 49561383 (+) True G37962
TU47365 other downstream 5506291 49562894 ~ 49563214 (+) True G37964

Expression Profile