RNA id: TU46760



Basic Information


Item Value
RNA id TU46760
length 200
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G37437
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 45678890 ~ 45679089 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tctaagtccctttgaatagcctgtgctgccaagattgtatctgctgagccacctattttagtatcatctgcaaatttgacaagtttgctaactatcccagagtccagatcattaatatagattagaaaaagcaaaggccctagtactgatccctgtggaactccactaacaacctcactccagttagaagtgactcctca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46758 lncRNA downstream 30052 45648401 ~ 45648838 (-) True G37435
TU46757 lncRNA downstream 30790 45647557 ~ 45648100 (-) True G37434
TU46748 lncRNA downstream 79293 45599034 ~ 45599597 (-) True G37425
TU46735 lncRNA downstream 215579 45462214 ~ 45463311 (-) True G37413
TU46682 lncRNA downstream 414556 45264082 ~ 45264334 (-) True G37367
TU46766 lncRNA upstream 129762 45808851 ~ 45822120 (-) True G37443
TU46780 lncRNA upstream 301644 45980733 ~ 45981158 (-) True G37456
TU46818 lncRNA upstream 675994 46355083 ~ 46355716 (-) True G37490
TU46823 lncRNA upstream 748861 46427950 ~ 46428949 (-) True G37493
TU46881 lncRNA upstream 959101 46638190 ~ 46672792 (-) True G37539
AMCG00019802 mRNA downstream 399872 45269326 ~ 45279018 (-) True AMCG00019802
AMCG00019800 mRNA downstream 645705 45019140 ~ 45033185 (-) True AMCG00019800
AMCG00019799 mRNA downstream 771390 44896794 ~ 44907500 (-) False AMCG00019799
AMCG00019801 mRNA downstream 826040 44852128 ~ 44852850 (-) True AMCG00019801
AMCG00019789 mRNA downstream 1121477 44555181 ~ 44557413 (-) True AMCG00019789
AMCG00019805 mRNA upstream 312983 45992072 ~ 46001203 (-) True AMCG00019805
AMCG00019806 mRNA upstream 427194 46106283 ~ 46133174 (-) True AMCG00019806
AMCG00019808 mRNA upstream 822758 46501847 ~ 46510145 (-) True AMCG00019808
AMCG00019807 mRNA upstream 853600 46532689 ~ 46543036 (-) True AMCG00019807
AMCG00019809 mRNA upstream 867224 46546313 ~ 46590268 (-) True AMCG00019809
TU46596 other downstream 768740 44896499 ~ 44910150 (-) False AMCG00019799
TU46276 other downstream 2022446 43577309 ~ 43656444 (-) False AMCG00019768
TU46211 other downstream 2317984 43298231 ~ 43360906 (-) True G36982
TU46040 other downstream 3022497 42644324 ~ 42656393 (-) True G36862
TU45993 other downstream 3134366 42544116 ~ 42544524 (-) True G36817
TU46822 other upstream 686249 46365338 ~ 46393098 (-) True G37492
TU47064 other upstream 2213114 47892203 ~ 47901603 (-) False AMCG00019824
TU47195 other upstream 2843579 48522668 ~ 48523702 (-) True G37806
TU47554 other upstream 5031659 50710748 ~ 50712143 (-) True AMCG00019866
TU47623 other upstream 5284324 50963413 ~ 50966929 (-) True AMCG00019869

Expression Profile