RNA id: TU46766



Basic Information


Item Value
RNA id TU46766
length 328
lncRNA type inter_gene
GC content 0.42
exon number 3
gene id G37443
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 45808851 ~ 45822120 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatggttgttggtgccagacgggccggtcaccaaaattggacagttgaagactggaaaaatgttgcctGGTCTGATAGTCTCGATTTCTGTTGAGACATTCAGATGGTAGAGTCAGAATTTGGCGGAAAATAGAATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46760 lncRNA downstream 129762 45678890 ~ 45679089 (-) True G37437
TU46758 lncRNA downstream 160013 45648401 ~ 45648838 (-) True G37435
TU46757 lncRNA downstream 160751 45647557 ~ 45648100 (-) True G37434
TU46748 lncRNA downstream 209254 45599034 ~ 45599597 (-) True G37425
TU46735 lncRNA downstream 345540 45462214 ~ 45463311 (-) True G37413
TU46780 lncRNA upstream 158613 45980733 ~ 45981158 (-) True G37456
TU46818 lncRNA upstream 532963 46355083 ~ 46355716 (-) True G37490
TU46823 lncRNA upstream 605830 46427950 ~ 46428949 (-) True G37493
TU46881 lncRNA upstream 816070 46638190 ~ 46672792 (-) True G37539
TU46894 lncRNA upstream 906822 46728942 ~ 46730170 (-) True G37551
AMCG00019802 mRNA downstream 529833 45269326 ~ 45279018 (-) True AMCG00019802
AMCG00019800 mRNA downstream 775666 45019140 ~ 45033185 (-) True AMCG00019800
AMCG00019799 mRNA downstream 901351 44896794 ~ 44907500 (-) False AMCG00019799
AMCG00019801 mRNA downstream 956001 44852128 ~ 44852850 (-) True AMCG00019801
AMCG00019789 mRNA downstream 1251438 44555181 ~ 44557413 (-) True AMCG00019789
AMCG00019805 mRNA upstream 169952 45992072 ~ 46001203 (-) True AMCG00019805
AMCG00019806 mRNA upstream 284163 46106283 ~ 46133174 (-) True AMCG00019806
AMCG00019808 mRNA upstream 679727 46501847 ~ 46510145 (-) True AMCG00019808
AMCG00019807 mRNA upstream 710569 46532689 ~ 46543036 (-) True AMCG00019807
AMCG00019809 mRNA upstream 724193 46546313 ~ 46590268 (-) True AMCG00019809
TU46596 other downstream 898701 44896499 ~ 44910150 (-) False AMCG00019799
TU46276 other downstream 2152407 43577309 ~ 43656444 (-) False AMCG00019768
TU46211 other downstream 2447945 43298231 ~ 43360906 (-) True G36982
TU46040 other downstream 3152458 42644324 ~ 42656393 (-) True G36862
TU45993 other downstream 3264327 42544116 ~ 42544524 (-) True G36817
TU46822 other upstream 543218 46365338 ~ 46393098 (-) True G37492
TU47064 other upstream 2070083 47892203 ~ 47901603 (-) False AMCG00019824
TU47195 other upstream 2700548 48522668 ~ 48523702 (-) True G37806
TU47554 other upstream 4888628 50710748 ~ 50712143 (-) True AMCG00019866
TU47623 other upstream 5141293 50963413 ~ 50966929 (-) True AMCG00019869

Expression Profile