RNA id: TU46818


Basic Information

Item Value
RNA id TU46818
length 359
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G37490
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 46355083 ~ 46355716 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aaaaaaatccagaaaaacgcatttcaaaaaagttatgaattgatttgcatgtaaatgagtgaaataagtatttgaccccttcgacttagtacttggtggcaaaacccttgttggcaatcacattttcaatgccctggctgagggaaggaggttctcacccaagatttaatggtacatggccccgtccatcgtccctttgatgcggtgcagttgtcctgtccccttagcagaaaaacacccccaaagcataatgtttccacctccatgtttgacggtggggatggtgttcttggggtcattcctcctcctccaaacacggcaagttgagttgatgccaaagagctcgattttggtctcct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46780 lncRNA downstream 373925 45980733 ~ 45981158 (-) True G37456
TU46766 lncRNA downstream 532963 45808851 ~ 45822120 (-) True G37443
TU46760 lncRNA downstream 675994 45678890 ~ 45679089 (-) True G37437
TU46758 lncRNA downstream 706245 45648401 ~ 45648838 (-) True G37435
TU46757 lncRNA downstream 706983 45647557 ~ 45648100 (-) True G37434
TU46823 lncRNA upstream 72234 46427950 ~ 46428949 (-) True G37493
TU46881 lncRNA upstream 282474 46638190 ~ 46672792 (-) True G37539
TU46894 lncRNA upstream 373226 46728942 ~ 46730170 (-) True G37551
TU46905 lncRNA upstream 435311 46791027 ~ 46791485 (-) True G37562
TU46952 lncRNA upstream 472067 46827783 ~ 46832760 (-) True G37608
AMCG00019806 mRNA downstream 221909 46106283 ~ 46133174 (-) True AMCG00019806
AMCG00019805 mRNA downstream 353880 45992072 ~ 46001203 (-) True AMCG00019805
AMCG00019802 mRNA downstream 1076065 45269326 ~ 45279018 (-) True AMCG00019802
AMCG00019800 mRNA downstream 1321898 45019140 ~ 45033185 (-) True AMCG00019800
AMCG00019799 mRNA downstream 1447583 44896794 ~ 44907500 (-) False AMCG00019799
AMCG00019808 mRNA upstream 146131 46501847 ~ 46510145 (-) True AMCG00019808
AMCG00019807 mRNA upstream 176973 46532689 ~ 46543036 (-) True AMCG00019807
AMCG00019809 mRNA upstream 190597 46546313 ~ 46590268 (-) True AMCG00019809
AMCG00019813 mRNA upstream 519218 46874934 ~ 46881287 (-) True AMCG00019813
AMCG00019815 mRNA upstream 526016 46881732 ~ 46907697 (-) True AMCG00019815
TU46596 other downstream 1444933 44896499 ~ 44910150 (-) False AMCG00019799
TU46276 other downstream 2698639 43577309 ~ 43656444 (-) False AMCG00019768
TU46211 other downstream 2994177 43298231 ~ 43360906 (-) True G36982
TU46040 other downstream 3698690 42644324 ~ 42656393 (-) True G36862
TU45993 other downstream 3810559 42544116 ~ 42544524 (-) True G36817
TU46822 other upstream 9622 46365338 ~ 46393098 (-) True G37492
TU47064 other upstream 1536487 47892203 ~ 47901603 (-) False AMCG00019824
TU47195 other upstream 2166952 48522668 ~ 48523702 (-) True G37806
TU47554 other upstream 4355032 50710748 ~ 50712143 (-) True AMCG00019866
TU47623 other upstream 4607697 50963413 ~ 50966929 (-) True AMCG00019869

Expression Profile