RNA id: TU46894



Basic Information


Item Value
RNA id TU46894
length 216
lncRNA type inter_gene
GC content 0.56
exon number 2
gene id G37551
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 46728942 ~ 46730170 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CGACCATCGACCTGTCGACGAGCTCAGATCGACCCGCTCTCGACCTCTGGACACCCGTGTCAACCTCTCGGACCTTGACGTTGACAACCTCGACTTCATCATCGAGGGGGACAGTCTGAGAGCGGAGGAGTTTGGTGAAGTGCTTCTACCATGAGAGCTGTCGATATACTTGGAGGGTCTGGACGTGGATGATCTAGAGACGGACCTTCTCACGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46881 lncRNA downstream 56150 46638190 ~ 46672792 (-) True G37539
TU46823 lncRNA downstream 299993 46427950 ~ 46428949 (-) True G37493
TU46818 lncRNA downstream 373226 46355083 ~ 46355716 (-) True G37490
TU46780 lncRNA downstream 747784 45980733 ~ 45981158 (-) True G37456
TU46766 lncRNA downstream 906822 45808851 ~ 45822120 (-) True G37443
TU46905 lncRNA upstream 60857 46791027 ~ 46791485 (-) True G37562
TU46952 lncRNA upstream 97613 46827783 ~ 46832760 (-) True G37608
TU46954 lncRNA upstream 105538 46835708 ~ 46909572 (-) True G37610
TU46971 lncRNA upstream 286667 47016837 ~ 47017163 (-) True G37622
TU47002 lncRNA upstream 569957 47300127 ~ 47300628 (-) True G37652
AMCG00019809 mRNA downstream 138674 46546313 ~ 46590268 (-) True AMCG00019809
AMCG00019807 mRNA downstream 185906 46532689 ~ 46543036 (-) True AMCG00019807
AMCG00019808 mRNA downstream 218797 46501847 ~ 46510145 (-) True AMCG00019808
AMCG00019806 mRNA downstream 595768 46106283 ~ 46133174 (-) True AMCG00019806
AMCG00019805 mRNA downstream 727739 45992072 ~ 46001203 (-) True AMCG00019805
AMCG00019813 mRNA upstream 144764 46874934 ~ 46881287 (-) True AMCG00019813
AMCG00019815 mRNA upstream 151562 46881732 ~ 46907697 (-) True AMCG00019815
AMCG00019816 mRNA upstream 191928 46922098 ~ 46933429 (-) True AMCG00019816
AMCG00019819 mRNA upstream 463393 47193563 ~ 47236854 (-) True AMCG00019819
AMCG00019818 mRNA upstream 515368 47245538 ~ 47280487 (-) True AMCG00019818
TU46822 other downstream 335844 46365338 ~ 46393098 (-) True G37492
TU46596 other downstream 1818792 44896499 ~ 44910150 (-) False AMCG00019799
TU46276 other downstream 3072498 43577309 ~ 43656444 (-) False AMCG00019768
TU46211 other downstream 3368036 43298231 ~ 43360906 (-) True G36982
TU46040 other downstream 4072549 42644324 ~ 42656393 (-) True G36862
TU47064 other upstream 1162033 47892203 ~ 47901603 (-) False AMCG00019824
TU47195 other upstream 1792498 48522668 ~ 48523702 (-) True G37806
TU47554 other upstream 3980578 50710748 ~ 50712143 (-) True AMCG00019866
TU47623 other upstream 4233243 50963413 ~ 50966929 (-) True AMCG00019869

Expression Profile