RNA id: TU47110


Basic Information

Item Value
RNA id TU47110
length 222
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G37738
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 48099398 ~ 48099619 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctcctccaaagctgcagacatctgcaagctcttcaacagtcccccctcctctcccataacacccaaacctcccaccgaccaagcctccttttcttcattctcacctctctcggactctgaagttttcgctctcctcctacgtcacaaacctacaacgtgtgccctggaccctctcccttctcgcctcctccaagagaccactcctgatctactccccttcat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47086 lncRNA downstream 127806 47906059 ~ 47971592 (-) True G37716
TU47053 lncRNA downstream 247367 47851603 ~ 47852031 (-) True G37690
TU47039 lncRNA downstream 410882 47687034 ~ 47688516 (-) True G37681
TU47002 lncRNA downstream 798770 47300127 ~ 47300628 (-) True G37652
TU46971 lncRNA downstream 1082235 47016837 ~ 47017163 (-) True G37622
TU47206 lncRNA upstream 444024 48543643 ~ 48549181 (-) True G37815
TU47230 lncRNA upstream 578557 48678176 ~ 48688913 (-) True G37836
TU47269 lncRNA upstream 767546 48867165 ~ 48867486 (-) True G37874
TU47340 lncRNA upstream 1262684 49362303 ~ 49366167 (-) True G37942
TU47349 lncRNA upstream 1377760 49477379 ~ 49477584 (-) True G37950
AMCG00019825 mRNA downstream 164145 47925796 ~ 47935253 (-) True AMCG00019825
AMCG00019827 mRNA downstream 177143 47909547 ~ 47922255 (-) True AMCG00019827
AMCG00019824 mRNA downstream 197465 47892228 ~ 47901933 (-) True AMCG00019824
AMCG00019826 mRNA downstream 220541 47803064 ~ 47878857 (-) True AMCG00019826
AMCG00019828 mRNA downstream 308511 47790564 ~ 47790887 (-) True AMCG00019828
AMCG00019829 mRNA upstream 77347 48176966 ~ 48184937 (-) True AMCG00019829
AMCG00019832 mRNA upstream 90518 48190137 ~ 48219430 (-) True AMCG00019832
AMCG00019838 mRNA upstream 278024 48377643 ~ 48400596 (-) True AMCG00019838
AMCG00019839 mRNA upstream 465991 48565610 ~ 48598978 (-) True AMCG00019839
AMCG00019846 mRNA upstream 1086695 49186314 ~ 49198381 (-) True AMCG00019846
TU47064 other downstream 197795 47892203 ~ 47901603 (-) False AMCG00019824
TU46822 other downstream 1706300 46365338 ~ 46393098 (-) True G37492
TU46596 other downstream 3189248 44896499 ~ 44910150 (-) False AMCG00019799
TU46276 other downstream 4442954 43577309 ~ 43656444 (-) False AMCG00019768
TU46211 other downstream 4738492 43298231 ~ 43360906 (-) True G36982
TU47195 other upstream 423049 48522668 ~ 48523702 (-) True G37806
TU47554 other upstream 2611129 50710748 ~ 50712143 (-) True AMCG00019866
TU47623 other upstream 2863794 50963413 ~ 50966929 (-) True AMCG00019869

Expression Profile