Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU47586 |
| length | 1304 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 4 |
| gene id | G38145 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 50830633 ~ 50843640 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0010927 | cellular component assembly involved in morphogenesis | biological_process |
| GO:0055001 | muscle cell development | biological_process |
| GO:0055002 | striated muscle cell development | biological_process |
| GO:0055004 | atrial cardiac myofibril assembly | biological_process |
| GO:0055014 | atrial cardiac muscle cell development | biological_process |
| GO:0031032 | actomyosin structure organization | biological_process |
| GO:0097435 | supramolecular fiber organization | biological_process |
| GO:0030239 | myofibril assembly | biological_process |
| GO:0070925 | organelle assembly | biological_process |
| GO:0061061 | muscle structure development | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU47577 | lncRNA | downstream | 44617 | 50784990 ~ 50786016 (-) | True | G38139 |
| TU47573 | lncRNA | downstream | 63224 | 50766797 ~ 50767409 (-) | True | G38135 |
| TU47568 | lncRNA | downstream | 81175 | 50748753 ~ 50749458 (-) | True | G38130 |
| TU47537 | lncRNA | downstream | 148284 | 50596196 ~ 50682349 (-) | False | AMCG00019865 |
| TU47468 | lncRNA | downstream | 341336 | 50486380 ~ 50489297 (-) | True | G38053 |
| TU47593 | lncRNA | upstream | 2337 | 50845977 ~ 50850167 (-) | True | G38152 |
| TU47594 | lncRNA | upstream | 2337 | 50845977 ~ 50849826 (-) | False | G38152 |
| AMCG00019866 | mRNA | downstream | 119019 | 50705840 ~ 50711614 (-) | False | AMCG00019866 |
| AMCG00019865 | mRNA | downstream | 132470 | 50682329 ~ 50698163 (-) | True | AMCG00019865 |
| AMCG00019862 | mRNA | downstream | 320766 | 50494102 ~ 50509867 (-) | True | AMCG00019862 |
| AMCG00019863 | mRNA | downstream | 479389 | 50345149 ~ 50351244 (-) | True | AMCG00019863 |
| AMCG00019860 | mRNA | downstream | 768509 | 49998081 ~ 50062124 (-) | True | AMCG00019860 |
| AMCG00019871 | mRNA | upstream | 76626 | 50920266 ~ 50921526 (-) | True | AMCG00019871 |
| AMCG00019868 | mRNA | upstream | 83640 | 50927280 ~ 50943520 (-) | True | AMCG00019868 |
| AMCG00019870 | mRNA | upstream | 102232 | 50945872 ~ 50952372 (-) | True | AMCG00019870 |
| AMCG00019869 | mRNA | upstream | 119780 | 50963420 ~ 50965530 (-) | False | AMCG00019869 |
| TU47554 | other | downstream | 118490 | 50710748 ~ 50712143 (-) | True | AMCG00019866 |
| TU47195 | other | downstream | 2306931 | 48522668 ~ 48523702 (-) | True | G37806 |
| TU47064 | other | downstream | 2929030 | 47892203 ~ 47901603 (-) | False | AMCG00019824 |
| TU46822 | other | downstream | 4437535 | 46365338 ~ 46393098 (-) | True | G37492 |
| TU46596 | other | downstream | 5920483 | 44896499 ~ 44910150 (-) | False | AMCG00019799 |
| TU47623 | other | upstream | 119773 | 50963413 ~ 50966929 (-) | True | AMCG00019869 |
