RNA id: AMCG00019882


Basic Information

Item Value
RNA id AMCG00019882
length 213
RNA type mRNA
GC content 0.61
exon number 2
gene id AMCG00019882
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 869061 ~ 870896 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCAGGAACGAGTGCCGATATCTCCCTGGTGCACTGGAAGCAGCAGTGGCTGGAGAACGGCACCCTGTACTTCCATGTGTCGATGAGCAGCGCAGAGCAGCTGTCGCAGGTCACCGAGCCCACGGTGCGCGAGCCCTCGGAGATCGTGGACGAGCAGCTGCACATCCTCCACATATCCGTCATGGTGGTGCCAGGGCTGCTGAGTGAGTAG

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74226 lncRNA downstream 311685 547826 ~ 557376 (-) False AMCG00019880
TU74186 lncRNA downstream 422193 445596 ~ 446868 (-) True G59324
TU74184 lncRNA downstream 486206 382652 ~ 382855 (-) True G59322
TU74144 lncRNA downstream 701038 167758 ~ 168023 (-) True G59283
TU74141 lncRNA downstream 769967 96833 ~ 99094 (-) True G59280
TU74236 lncRNA upstream 61413 932309 ~ 958515 (-) True G59362
TU74264 lncRNA upstream 393598 1264494 ~ 1264734 (-) True G59388
TU74266 lncRNA upstream 413529 1284425 ~ 1284745 (-) True G59390
TU74271 lncRNA upstream 476350 1347246 ~ 1347479 (-) True G59395
TU74272 lncRNA upstream 518449 1389345 ~ 1397225 (-) True G59396
AMCG00019881 mRNA downstream 275665 582350 ~ 593396 (-) True AMCG00019881
AMCG00019880 mRNA downstream 296234 535831 ~ 572827 (-) True AMCG00019880
AMCG00019878 mRNA downstream 387540 455460 ~ 481521 (-) True AMCG00019878
AMCG00019875 mRNA downstream 628928 235518 ~ 240133 (-) True AMCG00019875
AMCG00019883 mRNA upstream 74002 944898 ~ 945889 (-) True AMCG00019883
AMCG00019887 mRNA upstream 1003664 1874560 ~ 1889869 (-) True AMCG00019887
AMCG00019888 mRNA upstream 1042545 1913441 ~ 1920755 (-) True AMCG00019888
AMCG00019889 mRNA upstream 1234934 2105830 ~ 2135939 (-) True AMCG00019889
AMCG00019890 mRNA upstream 1289282 2160178 ~ 2185195 (-) True AMCG00019890
TU74284 other upstream 714023 1584919 ~ 1586000 (-) True G59408
TU74395 other upstream 1453392 2324288 ~ 2327415 (-) True G59505
TU74434 other upstream 1584015 2454911 ~ 2480799 (-) True G59530
TU74449 other upstream 1624003 2494899 ~ 2507020 (-) True G59545
TU74667 other upstream 2160960 3031856 ~ 3034335 (-) True G59712

Expression Profile