RNA id: AMCG00019892


Basic Information

Item Value
RNA id AMCG00019892
length 1512
RNA type mRNA
GC content 0.60
exon number 11
gene id AMCG00019892
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2226804 ~ 2247160 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCCCACGGCGTACCCCCTCAGCGTGGCCGAGCAAGCCCTGTGCCGATTGGCTCACCGTGGCCCCCGGCCCAAGCCTCTTCTCCAGCCCCTTGGCACAGAGCTGTGGATCTACGTGCAGAAGACCCGCAGTAAGCACAAGAAAAGGATGGAGGCCTCTTGCCTGGAGCTCGCTTTGGAGGGAGAGAGGCTCTGTAAGGCAGGAGACTTCAAGGGCGGGACGGCCTTCTTTGAGGCCGCAGTGCAGGTGGGTACGGAAGACCTGAAGACCCTAAGTGCCATTTACAGCCAGCTGGGCAACGCCTACTTCTACCTGAAAGAGTATGCCAAAGCTCTGGAGTACCACCGGCACGACCTCACCCTCGCCAGGACAATCGGGGACCGCATCGGGGAGGGCAAGGCCAGTGGAAACCTGGGAAACACTCTGAAGGTCCTGGGTCGTTTCGACGAGGCGATCGTCTGCTGCCATAGACACCTGGACATCTCCCAGGAGCAGGGAGACAAGGTGGGTGAAGCTCGGGCGCTCTACAACATTGGCAACGTGTACCACGCCAAGGGCAAGACGCAGTCCTGGAGCTGTGCTCAGGACCCCGTAGACCTGCCTCTGGACGTGAGGGAGACGCTGCAGAAGGCCTCCGACTTCTACGAGATGAACCTGTCTCTGGTGAAGGAGCTGGGGGACCGGGCGGCACAGGGCAGAGCTTTCGGGAACCTGGGCAACACCCACTACCTGCTGGGAAACTTTGTGGAAGCCATCAAATTCCACCGAGAGGCGGCTGAGCGCAGAGCCTACAGCAACCTTGGCAATGCCTTCATCTTCCTCGGCCAGTTCAGCACCGCCACTGAGCACTACAGAAAGACCCTACAGCTCTCCAGGCAGCTGAAGGACCAGGTGATGGAGGCCCAGGCTTGCTACAGCCTCGGCAACACCTACACCCTGCTGCAGGAGTATGGCAGGGCCATCGACTACCATCTGAAACACCTGCTGATCGCACAGGAGCTCACCGACAGAGTGGGGGAAGGCCGGGCGTGCTGGAGTCTCGGGAATGCATACGTGTCTCTGGGCAATCACAGAGAGGCTCTCCACTTCGCAAGGAAACACATGGAGATCTCCCGGGAGATCGGCGACCGCAATGGGGAGTTGACAGCCCGGATGAACATGGAGCAGCTGATGGATGCCCTGGGGATGTGCGAGGGTGACCTGTCATCTTGTGGATCCGAGTTTGAGGCCCAAGGAGCCAGGCCGAAGCTGAGCAAGAGGAACAGCATGGACAGCTTGGACCTGTGGAAATATCCCTCAGAAAAGGAACAAAACGGCGACAGCCATCACTTGGACTCGGACCTGTCGAGACGGACTCAGAACCACCTGTCTGGGCCGATCAGAAGGAAGGGTTGTGCTGATGGGCAATCGCTGGACGAGAGACAGTGGCTGGACTGCCGGGCCTCACCAGTCGACACCGATGACATCAGACTACAAGTGGCACCACCTGTGAGTCTCAGTCCGCCGGTCGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74368 lncRNA downstream 5610 2195803 ~ 2221194 (-) True G59485
TU74366 lncRNA downstream 21039 2195803 ~ 2205765 (-) False G59485
TU74365 lncRNA downstream 34257 2192334 ~ 2192547 (-) True G59484
TU74290 lncRNA downstream 564625 1605102 ~ 1662179 (-) True G59414
TU74279 lncRNA downstream 732831 1493686 ~ 1493973 (-) True G59403
TU74466 lncRNA upstream 327644 2574804 ~ 2575670 (-) True G59556
TU74817 lncRNA upstream 1243558 3490718 ~ 3491049 (-) True G59810
TU74835 lncRNA upstream 1350045 3597205 ~ 3597760 (-) True G59825
TU74837 lncRNA upstream 1392878 3640038 ~ 3642114 (-) True G59827
TU74836 lncRNA upstream 1398879 3646039 ~ 3647334 (-) True G59826
AMCG00019891 mRNA downstream 14031 2211677 ~ 2212773 (-) True AMCG00019891
AMCG00019890 mRNA downstream 41609 2160178 ~ 2185195 (-) True AMCG00019890
AMCG00019889 mRNA downstream 90865 2105830 ~ 2135939 (-) True AMCG00019889
AMCG00019888 mRNA downstream 306049 1913441 ~ 1920755 (-) True AMCG00019888
AMCG00019887 mRNA downstream 336935 1874560 ~ 1889869 (-) True AMCG00019887
AMCG00019899 mRNA upstream 216476 2463636 ~ 2479709 (-) True AMCG00019899
AMCG00019913 mRNA upstream 442742 2689902 ~ 2690317 (-) True AMCG00019913
AMCG00019914 mRNA upstream 458169 2705329 ~ 2705778 (-) True AMCG00019914
AMCG00019912 mRNA upstream 462802 2709962 ~ 2742168 (-) True AMCG00019912
AMCG00019911 mRNA upstream 525409 2772569 ~ 2781304 (-) True AMCG00019911
TU74284 other downstream 640804 1584919 ~ 1586000 (-) True G59408
TU74395 other upstream 77128 2324288 ~ 2327415 (-) True G59505
TU74434 other upstream 207751 2454911 ~ 2480799 (-) True G59530
TU74449 other upstream 247739 2494899 ~ 2507020 (-) True G59545
TU74667 other upstream 784696 3031856 ~ 3034335 (-) True G59712
TU74676 other upstream 860641 3107801 ~ 3111347 (-) True G59720

Expression Profile