RNA id: AMCG00019910


Basic Information

Item Value
RNA id AMCG00019910
length 7353
RNA type mRNA
GC content 0.68
exon number 46
gene id AMCG00019910
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2742701 ~ 2768063 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAGAAGGCAGCCAAACAGAGGATTACGACGGGCCCGGGGGTGCTGTCTCCTCTCCGCACCCTGAGCCCAGTGTCCGCAGCGTCCGACCGCCGCTCCcgctccccctcccccgccaGCCGCCCCCAGACCCCTGCCGGCGGTCAGGCCCAGCCTCGGGGGCTCGGCGGCAGCGTGCAGCTGGACGTGACGGAGGAGAGCGACGACAGGGCGCAGAAAGAGCAGATGGAAAACACTGAGGCGGGGAGAAGTCCCGGCATCCGCTACATCACCGAGGGCCTGATCAAGAAGGTGTCCAAACAGGACAACCTGGCCCTGGTGCAGACCTTGAACCTGGCTCAGGGAAAAGGCGGAGGCAAGAAGTTCAAGtTCATCGAGAACCTGGAGAAGTGCGAGAGGCTGCAAGTGCTGAACCTCAGTCACAACCTGATCGAGAAGCTGGAGAAGCTGGACAGGCTGCACCGGCTGAGAGAACTGCACGCGTCTCACAACAGAATCAGAGCACCTCTCCACGAGCTCGCCAAGCTGAAGCCGCTGAGGAACCTCACCACCCTGAGCGTGGCGGAGAACCCCATCGCCAACCTGCCCCACTGCCGCCTCTTCGCCATCTTCCACCTGCGGGCGCTGGAGCGGCTGGACGGGCAGATGGTCACCCAGCAGGAGCGGCTCGAGGCGCACCAGCGCTTCCACCTGGAGGAGGTGGAGCGCCTGGAGCAGGAGCTGGAGACGCAGCGGCGCGAAATGGAGGGGCTGAGGGAGGAGCAAGCGGCCGCCAGGCAGGAGCTGAACCAGCAGGAGGCGCTCAACAGGAGCCTGCGGAAGCACAACGAGGAGCAGAGAAGCAGCCAGGTCCAGCTGGAGAGGGAGGTGGAGACCAAGAACGAGCTGCTGAAGCAGAAGACCGTGGAGCTGACCAGGGCCTGCCACAAGCAGTACGAGCTGGAGCAGGAGCTGGCCTTCTACAAGATCGACGCCAAGTTTGAGCCCCTGGCCCACTACCCTGAGGAGgatgTGGACGTGGATGTGGAGAGCCCCCCAGGGGAGAGCCCCTACATCGGCAAGGCGCGCTACAAGAGGAACGCCCTCGCCACCCAGAGCCACCTCCCCGACGGCCGACGCCAGGCCACCGCAGGCCGGGTGGAGATGGACGCGGCTGGGGGACACAGGCCCGGAGCCGGACTTGTGCTATggcttgtgttgttgtgttgttgtgttgggcTCACGATCTGTGTGTCGGCAGCAGAGGAGCGCCTGGCGCAGCTGCACAGGGAGATCGAGAGCACGGAGCAGCAGATCCTGAGGGCCACGGCCGAGCTGCgtgagctggaggaggccgTGTCCCAGAAGCGGATCTGTGAGGCAGAGAAGGAGCAGCTCCGGCAGCAGCTGCGCAGGAAGATCCAGCAGCTGGGCCAGCTGAAGCAGGAGGCGCAGGCGCTGGAGGGCCGGCTGCAAAGGCACCGGGGGGAGATGAGGGAGACGCAGGGGGAGCTGGACCAGCTGCAGAGCCTGCTGGACACCCTGGACCCCAGCGACCCGCGCCACGCAGCGGGGCTGAGActgcagggagaggagagagagagagggaaactgCGCTGCGCTCGGCTCCTGTTGCTCTGCTTCTCCGGGGACGGCAGCAGCATGCTGGGCTCATCAGCGGCACAGTGTTTGCTCTGCGAAAGAGGAAGCGAGAGCCGGGGCGAGGAGGAAGCAGAGGAAATGATGTCGCTAGGACTGAACGGGCTCACAGCGCTGATTTTGGTCTGGTCTGTGTCACCAGTCAAGTGGGTGCGCGATAATAATGGCACAACAATGCCTGGCATCGCTGCAGCCCCAGACTGGGAGTTTGGGACGCTTGCCACAAGCCTGGCCATCATTAGAGCTGGCGTTCCAGCTCATGTGAAGGCTCAGATGGTCAGTAAGAGCCAGCAGTTGGACATGATGAGCAAGCAGTACCGGGAGCTGGAGAACAGGCTGGACGAGATGCTGTCCAGGATAGCCAAGGAGACGGAGGAGATCAAAGACCTGGAGCAGCAGCTGACCGAGGGGCAGATTGCGGCCAACGAGGCGCTGAAGCGCGACCTGGAGGGCATAATCGCGGGGCTGCAGGAGTACCTAGACGGGGTGAAGGGCCAGGCCCGGCGTGCGCAGGAGGAGTGCCGCGAGCTGCACCGTGAGAGGGAGGCCCTGCAGCGCCGCCTACACGATGCGGAGGAGCAGCGCCAGCAGCTGGAGACCGTGGCCACTGATGCAGAGAGCGCCCACCAGGAGCTGGCGGAGCTGCGGCGCGTCATGGAGGAGCTGCAGGGGGAGAACGCCGGGCTGCGCCAGGCCCAGGGCCGGCTGAGTGCCTACGAGGCTGAGCTGGAGGCCCAGCTGCAGGACCGAGACACCGAGGCCGGCCAGCTGAAGGAGGAGCTGGGCCGGCTGCGGCGCCTCAGTCTGATGGAGCAGTCGGCGCTGCAAGCGGAGCTGGCGAAGGAGCGGCAGGCCCGGGAGATCGCTCTGGCCCAAGCCCAGCAGGCCGCCGACCGGGAGCAGGAGAACGCCGAGCTGCAGGACCAGCTGAACACCATGCAGGAGGAGAAGACCACTATGCAGGAGAAGCTGCAGACGCTGCGGGGCGAGCTGGACCGGGCCAGAGATACGCTGCTCCGACCCAATGAGGTGGTGCGCCGAGTGGGAGAGCTGCAGAGGAAGATCGCCAGTGGGGTGGGAGAGATCAGGCCCTACGGCGAGGATGACAGCGTGGGCAGGAGCCTGGCGCAGCTGCAGCAGGAGCTGGCGCGCGTGCTGGGCCGGGCACAGGCCGAGAAGGAGGAGGCGGGCCGGCGGCAGGACCGGCTGACCCAGGAGATGGCGGCGCTGAGAGAGAAGCTGCGCCGGGCCCAGGAGGAGTACAGGGAGGCCTGCGACACGGCCGCACAGGCTAGGGTGGAGGCGCAGCGACGCGAGGGTGAGGCACAGGCGCAGCGGCtgcaggaggagctgcaggGGGCGCAGGAGCAGCAGGCCCTGACcgagcagcagctgcaggaggccGAGGACGAGCGCGAGAGACTGCTGGCCGAGCTGGAGCAGAGAGACGACCAGATGAAGGCCGAGGGCTCGCAGACCCAAAGTCAGCTGCGCCGGCTGGACCGGGAGCTGAGGGAGCTGAAGAGGTCCATGGCGGCCGCTGACCACACGGCCGCCCAGCAGCTGAGCCAGGCCCGGGAGCAGCTGCGCTCGCTGCACGGCACCGTCCGCAAGATCAGCCAGGAGAGGGCCGAGGATGAGGAGGAGCTGCAGGGGTCCAGGGCGCAGGCGGCACGGGCAGCAAGGGACCTGGCCCGGGCGGAAGCAGAGATCGAGCTGCTGCAGAAGCTGCTGGACGAGAGAGAGCGCCAGGCAAGGCATCTGCGCAGTACCGGTTCGGTGCAGCATGGGGCGGATCAGACGGACGCAGGGGGCCAGGCTTCCACAGCCCAGCGGCTGGAGCTGGACAGACTGGGCCGGGCGCTGGAAAGACAGCGGGCTCAGACCTGGCGGCTCCGGGAGCAGCTCAGCCGGGCCAGGCAGGAGACCGGCAGCGGTGTGGAGGAGCTGGTGGGGGAGATTGCGGCGCTGAGGGACACACTGGCCCAGCAGAGCGACTTCCTGTCTGGGGTGGCCGACTCTTCCGGGAGGAAGGGCCACTGGTGCTACGTTCCGTTCCCCCCCGACGCTCCCAGCGTGGGTTCCCAGAGCCGAGACTCGGGCCTGGGCTGGCACAACCCCGGCGAGCCTGATGGGGGGCCCCGGCGCGCCCGGCGCAGCAGGAGAGATCGAGTGGAGCCTGGAGCGCCCCCTGCAGGAGGGTACTGGATCTACTCCCCCACCGTGAACGGGCCCTGGCAGACCCCGAGGGGCCGAGGTGACACACCGGACAGCGGGGGGGACAGCGAAGGCGGCAGCAGTGTGTCGGGGAGCCACTTCGCTCCCCCCCCCGGCTCTGCCATCTACACCGTCCTGCCTGATGGCTCCCCCCTCCCGCAGGGCACCGTCATCTACGCCCCCCCTGCCCCAGGCACCTCCTTCGGCCCCGGGATGGTGGTCTACGGTCCCCCCCCTGCGGGCGTGCAGCTGGTGTACGGACCCACCCCTGCCAACTTCGCCGTGCCCCTCCTCCCCACCGCGGTGCTGCACTGCAACGTGCCGGAGCACCGGCAGCTGGAGCAGGACGTGTGCCAGCTGGAGGAGCGGCTGTCCGAGGCGCGGGTGGAGCTGCGCGGGCTGCAGACCCAGCACCGCgacctggagctggagctggaggagctgcggGGGGCCACGGCACGACCCCACCGGCGCAGGTACAAGGCTGGGAGGTCAAGAATAAATGAAGCCATTCCTGAGTTTTGTGGCCAGAGCCTAGTGTTCAGTGCTGTGTCTGCGTCTGTTAACCTGTTCCGTGATGTGACCGGGAACAGGGACTTGGCGGCAGCGGGCGCTGAGGGGGCTCTGGTGGCGGAGCTGGCGGCCGAGCTGGAGATGGAGCTGGCGCAGTCACGACGGCAGCAGGGCACAGCGCTGGAGGAGACGCAGTGTGTGGAGCGGACCCTGCTGCGGCGCCAGGCCCAGCTCCGAGAGGCCGACCGGCTGCTCATGGAGGCCGAGAGCGAGCTGAAGGACACGCGCAACAAGGCCCGGGACACGGCGCAGCGCTGCGGTGAGGCGGCACGGCGGCTGGCCGACACGGAGCGCGACGCAGAGGAACTGGAGCGCCGAGCGCGGGACACGGCCACCCAGCTGGTGCAGGCCAACCAGCAGCTCCGGACCCTGCAGGACGAGGTGAAGGAGCTGGGGGAGCACAAGGCCGAGAAGGAGGCCGTCCTGAGGGAGATCGAGACGGTGGTGTCCGGCAGAGACGCCGAGTTCCAGGCGCTGAGCGAGGAGACGGGCAGAGCGACCGAGAGCCTGGACAGCCTGCGGGCCGAGCTGCAGCTGGCAGAGAGCCGGGAAGCCCGGCACCTGGAGACCCTGAGAGAGGcggagagcctgctggcccagCGCAGGGCGGAGCTGGACACACTGGACCACCAGGTGGCCCTGCAGCAGGAGGAAGTGGCCCTGCTGGACAGGAAGCTGGCGCAGCGCCGGGAGGACGAGCGTCTCCTGGAGGACAGGGTGGACCGGCGGACGCAGGAGCTGGCCGAAATGCTGCGGGGGGGCGAGGCGGATGCCCAGGACCTGCAGAGACAGATCAAGGACCTCCGCACCGAGCTGGAGGCTCTGAGCGCCCATAAAGGGGAGCTGGGGGCCCAGGTGAGCGAGAGGAGGGCCCAGGTCTCGCTGCTCAAGCAGGAGGGccagagggaggaggaggcccTGCAGAGCACACAGGCCCAGGAGGAGAATCTTCTCTTAGTGGAGGTGAAATagCTGAAGCACGTCCTGGAGATGATCCAGCTGGAGAGCAGCGAGCTGCAGGGGCTCAAAGCACAGCACGACCAGAGAGTGGACGAGCTGGAGGCGGCCCAGAACGCCCTGCTGCAGGTGCGGGGGGAGTTGCAGGCCCTGCAGCGGGCAGCCCAGAGGCAGGCGGCGGAGAGCGGGCGGCAGAGGCAGCTGCAGGAGCGCGAGAGACGGGAGCTGGAGGCCCTGAGGCAGGAAGCCCACGCCCTGCAGGACAGCGTGGACACCCTGGCCAAGGAGAAGGGCCTGCTGGAGGAGCAGAGCCACGGCCTGGAGGGGAAGCTTGTGCAGGCCGAACGATCTCTGACGGCCGCCGAGGAGAGCATCAGGCTGTTGGAGGCTGAGAGCAGGAGGCTGGAGGCCGAGCTGTCCCAGGCGAGGCAGGAGCTCAGCCAGGCCAGGAGCCTCCAGCAGGAGACGAGCCGAGACACCGCGGCCGCCCGGCAGCGTCTGGAAGAGAAGGCAGAGGAGCTGGTGGCGCTGCAGCGAGACCTCGGAGACGCCAGACAGCAGCTGCAGACCCTGGAGGAGGATGTCCGTGTGGCCTCGCGCCGGCGTGACGAGCTGCTGGAGGAACAGTCCGCGCTGAGGGAGGCTCTGGACCACGGGACCCGCAGGGCCCAGGAGAGCCAGCGccgagaggagagacagagccaggagctgcaggagctCGGAGCCCAGATCGACAAGAGCAGAGCCCATCTGGAGCAGCAGGACCGGtctCTCAAGGCACTGCAGAGGGAGGCGGTGGAGGCACAGGAGGGCCACAGGCACCGGCTGGAGGCCCTGCAGGCGCAGCTGGGGGCGGTGGAGGGGGCGCTGGCAGAGCGGGGCGGCCAACTGGAGCGGGCAGAGGAGCAGGACCAGCGcctgcagagagagcaggagcagAGCGCCGCCCTGCAGGACAGGGTTGCCCTCCTCGTGCAAGTACTCTGCTCTGGCTGTGCTGGCAACACTTCCTGCGTATTGACAAACGAGCGCGGGGGCGAGTTGGAGCGCCTGCAGGAGACGCTGAGCGCTGAGCGGAGGAGGGCGGAGAGGAAGCTGGCGGCCCTGAGGACGCAGAGCCGGGCCGAGCGGGAGCGGGTGGAGGACGCCCTGCGGGACCGGGCCCGGCTGCAAGCGGATCTGGCCATGGCGGAGCGGGCCGCCCAGGAGCAGCACCAGCGAGCGCGCAGCCTGCAGGGGCAGCTCAACGCCGTGTCgcaggagctgctgcagctcAGAGATAAGCTGCGGCGCCAGCAGGAAGTGGAGTCACGCCAGCGGGAGATCCAGGAGGCCATGCGCTCGCTGCGGTCCGAGGTGAAGGCGGAGATGAGCGGCGCGGTCGGGGAGCCGGAGACGCCGGACCCGTCGGACACGGAGAGCCTGAAGGAGAACCGGCCCCACCGCGCCGCCCCGGGCCGGCCGGCCTTCAGCACCCGGGACGAGCAGTGGCGCGGGGAGGCCCAGCGTGAGAGACTGAGGCAGCAGGAGGACCGGCTGAAGGCGCAGCTGCGCAGGCGCATGTGGTCGCAGGCGGAGGCGCTGAGCCAGCGGCGGCAGCAGACGGAGGGCAGCCTGCAGGGGCTGCGCAGGCGGGTCGACGCGCTGGACGAGCTGCTCGGCAACTCCCCCGACGCCCCCCCGAGCCCCAACCACAGCGAGCCGCCGCTCAAACACGGCCGGTCTGATCTGTCAGGGGGTCTGGGTTCCCCCCGCCCGAGAGCGCCGGACCCCACACTGCGCCCGGGCAGCCCCGTGCGCCTCGACTCCTCAGCCCCCGAGAGAGACCGAGCCGTGATCGCTCCGGACATTCAGGTCACGTCCCTCCAGGAAACGCGTTCTCTGGCTCCTGCAAGACTGCAATCGCGTGGCACTGGAGACAGCCGGCCCTGGCGTGTGGAGAACAACACCGGCTCGGGAATCGTGTGA

Function

GO: NA

KEGG:

id description
K16770 CNTRL; centriolin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74500 lncRNA upstream 25786 2715528 ~ 2716915 (+) True G59578
TU74467 lncRNA upstream 108571 2583694 ~ 2634130 (+) True G59557
TU74468 lncRNA upstream 154632 2583694 ~ 2588069 (+) False G59557
TU74348 lncRNA upstream 561632 2180603 ~ 2181069 (+) True G59467
TU74341 lncRNA upstream 575261 2164521 ~ 2167440 (+) True G59460
TU74548 lncRNA downstream 19847 2787910 ~ 2788239 (+) True G59625
TU74563 lncRNA downstream 57528 2825591 ~ 2826637 (+) True G59638
TU74574 lncRNA downstream 115651 2883714 ~ 2885416 (+) True G59646
TU74584 lncRNA downstream 194445 2962508 ~ 2969578 (+) False AMCG00019920
TU74654 lncRNA downstream 263815 3031878 ~ 3034341 (+) True G59700
AMCG00019907 mRNA upstream 72688 2666705 ~ 2670013 (+) True AMCG00019907
AMCG00019904 mRNA upstream 79541 2658045 ~ 2663160 (+) True AMCG00019904
AMCG00019905 mRNA upstream 86668 2650937 ~ 2656033 (+) True AMCG00019905
AMCG00019906 mRNA upstream 106456 2632245 ~ 2636245 (+) True AMCG00019906
AMCG00019908 mRNA upstream 111036 2620970 ~ 2631665 (+) True AMCG00019908
AMCG00019916 mRNA downstream 22710 2790773 ~ 2810001 (+) True AMCG00019916
AMCG00019917 mRNA downstream 84146 2852209 ~ 2866964 (+) True AMCG00019917
AMCG00019915 mRNA downstream 101642 2869705 ~ 2876818 (+) True AMCG00019915
AMCG00019921 mRNA downstream 142181 2910244 ~ 2918881 (+) True AMCG00019921
AMCG00019920 mRNA downstream 194448 2962511 ~ 2969595 (+) True AMCG00019920
TU74243 other upstream 1664638 1075504 ~ 1078063 (+) False AMCG00019884
TU74166 other upstream 2297171 441598 ~ 445530 (+) True G59305
TU74774 other downstream 473376 3241439 ~ 3250062 (+) False AMCG00019934
TU75012 other downstream 2055750 4823813 ~ 4835797 (+) False AMCG00019967
TU75242 other downstream 2587709 5355772 ~ 5361863 (+) True G60137
TU75235 other downstream 2590401 5358464 ~ 5359365 (+) True G60132
TU75390 other downstream 3414649 6182712 ~ 6186084 (+) False AMCG00020000

Expression Profile