RNA id: AMCG00019914


Basic Information

Item Value
RNA id AMCG00019914
length 450
RNA type mRNA
GC content 0.68
exon number 1
gene id AMCG00019914
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2705329 ~ 2705778 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCAAGCCACCTCCCCCCTCTgtgtcctgctgctgctggaacTGGGCCGGTCCTTCACAGCCAATGGCCTGGACAGAGCCTGCCGGGCCAGGAGGGCCAGGGAAAACCTGGCGATCACCAGGGACGTGTGGCGGCCCCCCTGGGCGGCTCCGGTGGGGCCATGGGAGAAGAAGTCCCAGGAGGCCGACTCTCTGGTGAGGGCCGTGATGGAGCTGCAGGGCCAGGGGCAGGTCCAGGCCAAGGAGCGGGCCGGCTTTCGGTTCCGCTTcgggaggggagaggaagaggaggaggaagagggagaggcgCTGCAGCTGCTGGGAGAGGAGGACTGGGCCCAGGCGGCCTCCCTCGCTCACAAGCGCTCCGGCACCCTGCAGACGCTGGCTGAGGAGCTCAACGGCTACCGCAGGAAAGTGGGCATCAGCTTCCGCTTTGGCAGGAAATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74466 lncRNA downstream 129659 2574804 ~ 2575670 (-) True G59556
TU74368 lncRNA downstream 484135 2195803 ~ 2221194 (-) True G59485
TU74366 lncRNA downstream 499564 2195803 ~ 2205765 (-) False G59485
TU74365 lncRNA downstream 512782 2192334 ~ 2192547 (-) True G59484
TU74290 lncRNA downstream 1043150 1605102 ~ 1662179 (-) True G59414
TU74817 lncRNA upstream 784940 3490718 ~ 3491049 (-) True G59810
TU74835 lncRNA upstream 891427 3597205 ~ 3597760 (-) True G59825
TU74837 lncRNA upstream 934260 3640038 ~ 3642114 (-) True G59827
TU74836 lncRNA upstream 940261 3646039 ~ 3647334 (-) True G59826
TU74865 lncRNA upstream 965245 3671023 ~ 3675014 (-) True G59852
AMCG00019913 mRNA downstream 15012 2689902 ~ 2690317 (-) True AMCG00019913
AMCG00019899 mRNA downstream 225620 2463636 ~ 2479709 (-) True AMCG00019899
AMCG00019892 mRNA downstream 458169 2226804 ~ 2247160 (-) True AMCG00019892
AMCG00019891 mRNA downstream 492556 2211677 ~ 2212773 (-) True AMCG00019891
AMCG00019890 mRNA downstream 520134 2160178 ~ 2185195 (-) True AMCG00019890
AMCG00019912 mRNA upstream 4184 2709962 ~ 2742168 (-) True AMCG00019912
AMCG00019911 mRNA upstream 66791 2772569 ~ 2781304 (-) True AMCG00019911
AMCG00019919 mRNA upstream 105573 2811351 ~ 2825112 (-) True AMCG00019919
AMCG00019918 mRNA upstream 120545 2826323 ~ 2833406 (-) True AMCG00019918
AMCG00019923 mRNA upstream 178502 2884280 ~ 2909373 (-) True AMCG00019923
TU74449 other downstream 198309 2494899 ~ 2507020 (-) True G59545
TU74434 other downstream 224530 2454911 ~ 2480799 (-) True G59530
TU74395 other downstream 377914 2324288 ~ 2327415 (-) True G59505
TU74284 other downstream 1119329 1584919 ~ 1586000 (-) True G59408
TU74667 other upstream 326078 3031856 ~ 3034335 (-) True G59712
TU74676 other upstream 402023 3107801 ~ 3111347 (-) True G59720
TU74745 other upstream 460459 3166237 ~ 3183066 (-) False AMCG00019942
TU74744 other upstream 472263 3178041 ~ 3183066 (-) True AMCG00019942
TU74813 other upstream 774004 3479782 ~ 3480109 (-) True G59806

Expression Profile