RNA id: AMCG00019919


Basic Information

Item Value
RNA id AMCG00019919
length 1714
RNA type mRNA
GC content 0.54
exon number 8
gene id AMCG00019919
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2811351 ~ 2825112 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCGCCACGGACGGCACGGACTGCGGGGACATGAAGCCCGTGAGCAGGCGGGAGCGCCAGGCAGGCGTTCCTCGGTTCACCCAGGAGGATTTTGACGCAGAGCTTGAGGATGCTGATGGGAAAATTGGTCTCTGTGGGATGCTGCTGGTGGCCTTTTCTGTCCTGCTGACGCTGGTCACTCTGCCCATCTCCATATGGATGTGCATCAAGATCGTGAAAGAGTATGAACGCGCCATTATCTTCCGACTGGGGCGGATCGTGCGCGGGGGAGCCAAAGGACCAGGTCTGTTCCTCATTCTGCCATGCACCGACAGCTTCATCAACGTGGACATGCGCACCATCACCTTTGATATCCCCCCCCAGGAGGTGTTGACCAAGGACTCGGTGACGGTGTGCGTGGACGGCGTGGTTTACTACCGGGTGCAGAACGCCACCCTGGCAGTGGCTAACATCACCAATGCCGATGCCGCCACCCGGTTGCTGGCCCAGACCACCCTGCGCAACGTCCTGGGCACCAAGAACCTGTCTGAGATCCTGTCCGATCGCGAGGAGATCGCCCACAGCATGCAGTCCACCCTGGATGACGCAACCGATGACTGGGGCATCAAGGTGGAGCGCGTGGAGATCAAGGACGTCAAGTTGCCCCTCCAGCTGCAGAGAGCCATGGCTGCGGAGGCGGAGGCGACCCGCGAAGCCCGGGCCAAGGTGATCGCAGCCGAAGGTGAGATGAACGCCTCACGTGCCCTGAAGGAGGCCTCTATGGTGATCGCCGAGTCGCCCTCCGCGCTGCAGCTGCGCTACCTGCAGACGCTCAACACCATCGCGGCCGAGAAGAACTCCACCATCATCTTCCCACTGCCCATCGACATTATGCAGGGGCTGATGGGCAGCAGGCACTGAGCGGGGCGGCCCAGCACCCCCGAGCCGACTGCCCATTTATCTCAGTTGTGAAACCCAGAGCTTCGCTTATTTGTAACCCGCCGCCGCGGTCGGGTCTGTTGCTCGGTGCGCTGGCTGGGGCGGGACGATTGTTTTTGCTGGTGGCCTTCAGTCCGTTCTCCTGTCAGCTTGACTGTTCAACCTTGTTGTTGGTGTGAGGAGGGCGGGCAGAGGGGTCTGGTAAAAAGGGATTTCCCAATTATCCTTCTAAAACGGTGCTTCCAAGTGCTCAGTGCTCAGATCTGGCTTAAAACTGAGAGCTAAAAGTTCAAACATATCTGCAATTTGAGATTTTAAGGTTAATTGCTCATCAGGgcttgattttatgtttttaattgggaTAATATAAGCGGTTTAAATCATGAACACATTTTGTCTTTGAGGATTTCCAGTTGACTTGCTCAGCTGTGCTGCCGTTTTGAATTAAATCTCCATTGGGACGGTAGTTGACTCCCTAAATCCATCCATCTATGAAACACACGGACCTGCATTAGGGTTGTGTGTGGCAGGAGACCCTTTCCCTTAGTGTAGCTGGAGAGGTTTCAGCGCCGCCCACAGCATAGCAAGGCAAGGCATGTTGGGAATTCCCCCCCAACTGTGGCGTCAAAGCTTTATGACCAGAAAGCCCCTCAGTTCAGAGCACAGGTTGaaggattgtttattttttgttacttttctgCACATCTCTATCCCTGTATTACTTTCAATGGTAAATAAttgcttatttaatattaattatatatgtgtacCCAGCCAGGCATACGATTGTCTTTCAA

Function

GO: NA

KEGG:

id description
K17286 STOM; erythrocyte band 7 integral membrane protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74466 lncRNA downstream 235681 2574804 ~ 2575670 (-) True G59556
TU74368 lncRNA downstream 590157 2195803 ~ 2221194 (-) True G59485
TU74366 lncRNA downstream 605586 2195803 ~ 2205765 (-) False G59485
TU74365 lncRNA downstream 618804 2192334 ~ 2192547 (-) True G59484
TU74290 lncRNA downstream 1149172 1605102 ~ 1662179 (-) True G59414
TU74817 lncRNA upstream 665606 3490718 ~ 3491049 (-) True G59810
TU74835 lncRNA upstream 772093 3597205 ~ 3597760 (-) True G59825
TU74837 lncRNA upstream 814926 3640038 ~ 3642114 (-) True G59827
TU74836 lncRNA upstream 820927 3646039 ~ 3647334 (-) True G59826
TU74865 lncRNA upstream 845911 3671023 ~ 3675014 (-) True G59852
AMCG00019911 mRNA downstream 30047 2772569 ~ 2781304 (-) True AMCG00019911
AMCG00019912 mRNA downstream 69183 2709962 ~ 2742168 (-) True AMCG00019912
AMCG00019914 mRNA downstream 105573 2705329 ~ 2705778 (-) True AMCG00019914
AMCG00019913 mRNA downstream 121034 2689902 ~ 2690317 (-) True AMCG00019913
AMCG00019899 mRNA downstream 331642 2463636 ~ 2479709 (-) True AMCG00019899
AMCG00019918 mRNA upstream 1211 2826323 ~ 2833406 (-) True AMCG00019918
AMCG00019923 mRNA upstream 59168 2884280 ~ 2909373 (-) True AMCG00019923
AMCG00019922 mRNA upstream 95929 2921041 ~ 2942635 (-) True AMCG00019922
AMCG00019927 mRNA upstream 145732 2970844 ~ 2989870 (-) True AMCG00019927
AMCG00019928 mRNA upstream 209279 3034391 ~ 3054507 (-) True AMCG00019928
TU74449 other downstream 304331 2494899 ~ 2507020 (-) True G59545
TU74434 other downstream 330552 2454911 ~ 2480799 (-) True G59530
TU74395 other downstream 483936 2324288 ~ 2327415 (-) True G59505
TU74284 other downstream 1225351 1584919 ~ 1586000 (-) True G59408
TU74667 other upstream 206744 3031856 ~ 3034335 (-) True G59712
TU74676 other upstream 282689 3107801 ~ 3111347 (-) True G59720
TU74745 other upstream 341125 3166237 ~ 3183066 (-) False AMCG00019942
TU74744 other upstream 352929 3178041 ~ 3183066 (-) True AMCG00019942
TU74813 other upstream 654670 3479782 ~ 3480109 (-) True G59806

Expression Profile