RNA id: AMCG00019982


Basic Information

Item Value
RNA id AMCG00019982
length 516
RNA type mRNA
GC content 0.63
exon number 2
gene id AMCG00019982
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 5158359 ~ 5159320 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCAGGTAGTGCTGGCAGTTTGCCtttgctggctgtgtgtgtcctGCCGTGGCTGCCCCGGGTCGCCTCCGGGGGAAGGGGACCTGTTACTGTGCAGGTCCTGCGGACACGAAGTGGCGTTCAGCTCCGACCTGCGCTTCATCGCGAGTCGGCTGGCTTTGGCGCAGCGGAACCACACGGGTATCGGAGACAGGAGGGTCCCCGTCCAGCTGTTTGAAAACCCACAAGGGTTTCGGTTCCAGGTTGTCACCTTGAAGAAAGCTGCGGTGCAGAAGCACTGGCCTGCGGACAGACATTTCTCATGGTTCCCGGGATTCTCCTGGACCATAGCAACTTGCCCGAGATGCCGCGCACACTTGGGTTGGGGCTTTCAGCCCAGTGAGTGGCCGGCCCGGGTGCCGGAGAGGCGCTTCGAGGAGGCGGCGGACACGTTCGTGGCGCTGATCGTGGAGCGGCTGCTGCTGGAGGACTACGCCGCCACGCTGCTCCTGACCCCCAAAGCATTCAAGAGCTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU75169 lncRNA downstream 1166 5153058 ~ 5157193 (-) False G60088
TU75166 lncRNA downstream 1166 5155008 ~ 5157193 (-) True G60088
TU75100 lncRNA downstream 169304 4985681 ~ 4989055 (-) True G60034
TU75029 lncRNA downstream 309563 4844797 ~ 4848796 (-) True G59979
TU75008 lncRNA downstream 358090 4796726 ~ 4800269 (-) True G59963
TU75185 lncRNA upstream 2686 5162006 ~ 5162521 (-) True G60099
TU75186 lncRNA upstream 4444 5163764 ~ 5163995 (-) True G60100
TU75187 lncRNA upstream 5947 5165267 ~ 5165488 (-) True G60101
TU75188 lncRNA upstream 7039 5166359 ~ 5167290 (-) True G60102
TU75287 lncRNA upstream 311999 5471319 ~ 5523619 (-) True G60179
AMCG00019983 mRNA downstream 5306 5132046 ~ 5153053 (-) True AMCG00019983
AMCG00019974 mRNA downstream 89320 5065640 ~ 5069039 (-) True AMCG00019974
AMCG00019976 mRNA downstream 96847 5060491 ~ 5061512 (-) False AMCG00019976
AMCG00019975 mRNA downstream 152376 4992636 ~ 5005983 (-) True AMCG00019975
AMCG00019971 mRNA downstream 175148 4969190 ~ 4983211 (-) True AMCG00019971
AMCG00019985 mRNA upstream 8046 5167366 ~ 5206880 (-) True AMCG00019985
AMCG00019984 mRNA upstream 48453 5207773 ~ 5230138 (-) True AMCG00019984
AMCG00019987 mRNA upstream 74910 5234230 ~ 5234454 (-) True AMCG00019987
AMCG00019993 mRNA upstream 117344 5276664 ~ 5277926 (-) False AMCG00019993
AMCG00019992 mRNA upstream 132272 5291592 ~ 5292616 (-) True AMCG00019992
TU75113 other downstream 97082 5012444 ~ 5061277 (-) True AMCG00019976
TU74813 other downstream 1678250 3479782 ~ 3480109 (-) True G59806
TU74745 other downstream 1975293 3166237 ~ 3183066 (-) False AMCG00019942
TU74744 other downstream 1975293 3178041 ~ 3183066 (-) True AMCG00019942
TU74676 other downstream 2047012 3107801 ~ 3111347 (-) True G59720
TU75216 other upstream 104594 5263914 ~ 5265925 (-) True G60118
TU75221 other upstream 117342 5276662 ~ 5278291 (-) True AMCG00019993
TU75228 other upstream 132270 5291590 ~ 5292673 (-) False AMCG00019992
TU75483 other upstream 1291302 6450622 ~ 6453598 (-) False AMCG00020017
TU75489 other upstream 1304228 6463548 ~ 6466586 (-) False G60348

Expression Profile