Item | Value |
---|---|
RNA id | TCONS_00009402 |
length | 840 |
lncRNA type | sense_intronic |
GC content | 0.39 |
exon number | 5 |
gene id | XLOC_004754 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_007123.7 |
NCBI id | CM002896.2 |
chromosome length | 49182954 |
location | 26894321 ~ 26896616 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0048729 | tissue morphogenesis | biological_process |
GO:0048731 | system development | biological_process |
GO:0035239 | tube morphogenesis | biological_process |
GO:0021546 | rhombomere development | biological_process |
GO:0007517 | muscle organ development | biological_process |
GO:0007519 | skeletal muscle tissue development | biological_process |
GO:0048513 | animal organ development | biological_process |
GO:0021593 | rhombomere morphogenesis | biological_process |
GO:0021594 | rhombomere formation | biological_process |
GO:0035295 | tube development | biological_process |
GO:0009887 | animal organ morphogenesis | biological_process |
GO:0007275 | multicellular organism development | biological_process |
GO:0009888 | tissue development | biological_process |
GO:0060429 | epithelium development | biological_process |
GO:0048562 | embryonic organ morphogenesis | biological_process |
GO:0048568 | embryonic organ development | biological_process |
GO:0009653 | anatomical structure morphogenesis | biological_process |
GO:0048856 | anatomical structure development | biological_process |
GO:0048596 | embryonic camera-type eye morphogenesis | biological_process |
GO:0048598 | embryonic morphogenesis | biological_process |
GO:0031076 | embryonic camera-type eye development | biological_process |
GO:0031099 | regeneration | biological_process |
GO:0048646 | anatomical structure formation involved in morphogenesis | biological_process |
GO:0048048 | embryonic eye morphogenesis | biological_process |
GO:0061061 | muscle structure development | biological_process |
GO:0032501 | multicellular organismal process | biological_process |
GO:0032502 | developmental process | biological_process |
GO:0060537 | muscle tissue development | biological_process |
GO:0060538 | skeletal muscle organ development | biological_process |
GO:0007417 | central nervous system development | biological_process |
GO:0007420 | brain development | biological_process |
GO:0014706 | striated muscle tissue development | biological_process |
GO:0007423 | sensory organ development | biological_process |
GO:0030902 | hindbrain development | biological_process |
GO:0060322 | head development | biological_process |
GO:0009790 | embryo development | biological_process |
GO:0043565 | sequence-specific DNA binding | molecular_function |
GO:0003676 | nucleic acid binding | molecular_function |
GO:0003677 | DNA binding | molecular_function |
GO:0003700 | DNA-binding transcription factor activity | molecular_function |
GO:0000976 | transcription regulatory region sequence-specific DNA binding | molecular_function |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | molecular_function |
GO:0140110 | transcription regulator activity | molecular_function |
GO:0001067 | regulatory region nucleic acid binding | molecular_function |
GO:1990837 | sequence-specific double-stranded DNA binding | molecular_function |
ensembl_id | ENSDART00000153141 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00010944 | lncRNA | upstream | 60129 | 26737431 ~ 26834192 (+) | True | XLOC_004752 |
TCONS_00010943 | lncRNA | upstream | 168540 | 26638127 ~ 26725781 (+) | False | XLOC_004750 |
TCONS_00010743 | lncRNA | upstream | 202270 | 26691819 ~ 26692051 (+) | True | XLOC_004751 |
TCONS_00010942 | lncRNA | upstream | 301023 | 26589644 ~ 26593298 (+) | False | XLOC_004748 |
TCONS_00010941 | lncRNA | upstream | 301023 | 26589644 ~ 26593298 (+) | True | XLOC_004748 |
TCONS_00009425 | lncRNA | downstream | 317144 | 27213760 ~ 27229858 (+) | False | XLOC_004765 |
TCONS_00009431 | lncRNA | downstream | 335128 | 27231744 ~ 27232651 (+) | False | XLOC_004766 |
TCONS_00010945 | lncRNA | downstream | 1480414 | 28377030 ~ 28381255 (+) | True | XLOC_004777 |
TCONS_00010744 | lncRNA | downstream | 1721085 | 28617701 ~ 28617965 (+) | True | XLOC_004779 |
TCONS_00009458 | lncRNA | downstream | 2036908 | 28933524 ~ 28946150 (+) | False | XLOC_004786 |
TCONS_00009396 | mRNA | upstream | 168273 | 26621906 ~ 26726048 (+) | False | XLOC_004750 |
TCONS_00009398 | mRNA | upstream | 168273 | 26632448 ~ 26726048 (+) | False | XLOC_004750 |
TCONS_00009397 | mRNA | upstream | 168540 | 26622010 ~ 26725781 (+) | False | XLOC_004750 |
TCONS_00009400 | mRNA | upstream | 178375 | 26706745 ~ 26715946 (+) | True | XLOC_004750 |
TCONS_00009399 | mRNA | upstream | 196736 | 26670778 ~ 26697585 (+) | False | XLOC_004750 |
TCONS_00009404 | mRNA | downstream | 125363 | 27021979 ~ 27028808 (+) | False | XLOC_004755 |
TCONS_00009403 | mRNA | downstream | 125363 | 27021979 ~ 27028808 (+) | False | XLOC_004755 |
TCONS_00009405 | mRNA | downstream | 125901 | 27022517 ~ 27027017 (+) | False | XLOC_004755 |
TCONS_00009406 | mRNA | downstream | 128060 | 27024676 ~ 27026373 (+) | True | XLOC_004755 |
TCONS_00009407 | mRNA | downstream | 137978 | 27034594 ~ 27060129 (+) | False | XLOC_004756 |
TCONS_00009383 | other | upstream | 1246078 | 25648127 ~ 25648243 (+) | True | XLOC_004738 |
TCONS_00009380 | other | upstream | 1416415 | 25468312 ~ 25477906 (+) | True | XLOC_004734 |
TCONS_00009372 | other | upstream | 1642534 | 25223799 ~ 25251787 (+) | False | XLOC_004732 |
TCONS_00009364 | other | upstream | 2328729 | 24565478 ~ 24565592 (+) | True | XLOC_004724 |
TCONS_00009361 | other | upstream | 2475981 | 24418224 ~ 24418340 (+) | True | XLOC_004723 |
TCONS_00009419 | other | downstream | 238253 | 27134869 ~ 27134967 (+) | True | XLOC_004762 |
TCONS_00009421 | other | downstream | 260327 | 27156943 ~ 27163064 (+) | False | XLOC_004764 |
TCONS_00009426 | other | downstream | 322377 | 27218993 ~ 27220589 (+) | True | XLOC_004765 |
TCONS_00009428 | other | downstream | 334679 | 27231295 ~ 27234421 (+) | False | XLOC_004766 |
TCONS_00009459 | other | downstream | 2048916 | 28945532 ~ 28945646 (+) | True | XLOC_004786 |