RNA id: AMCG00020077


Basic Information

Item Value
RNA id AMCG00020077
length 321
RNA type mRNA
GC content 0.45
exon number 3
gene id AMCG00020077
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 9077740 ~ 9083125 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gaTCAGTTTGACAACTTGGAAAAGCATACACAATGGGGAATCGAGTTTGTGGAGAGATACACCAAATTTGTGAAAGAGAGATCAGAAATTGAAATCAGCTATGCAAAGCAAATTAGGAACCTATCAAAGAAGTATCAGCCCAAGAAGAACTCCAAGGAGGAGGAAGAATTCAAGTACACATCATGTCGGTCCTTCTTAACCACCCTGAATGAGCTGAATGACTATGCCGGCCAGCACGAGGTCATCGCTGAGAACCTCACCTCACAGATCATTTCGGAGCTGTCGCGGTACATTCAGGAGCTCAAGCAAGAAAGGAAATCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU76021 lncRNA downstream 60334 8980273 ~ 9017406 (-) True G60774
TU75971 lncRNA downstream 267847 8807020 ~ 8809893 (-) True G60730
TU75966 lncRNA downstream 278573 8798964 ~ 8799167 (-) True G60725
TU75964 lncRNA downstream 281425 8793968 ~ 8796315 (-) True G60723
TU75879 lncRNA downstream 1030499 8044609 ~ 8047241 (-) True G60656
TU76097 lncRNA upstream 74802 9157927 ~ 9160733 (-) True G60833
TU76105 lncRNA upstream 186435 9269560 ~ 9303247 (-) True G60839
TU76310 lncRNA upstream 844852 9927977 ~ 9928866 (-) True G60993
TU76350 lncRNA upstream 1002788 10085913 ~ 10091086 (-) True G61027
TU76378 lncRNA upstream 1120714 10203839 ~ 10205678 (-) True G61052
AMCG00020078 mRNA downstream 27972 9021823 ~ 9049768 (-) True AMCG00020078
AMCG00020081 mRNA downstream 111710 8964561 ~ 8966030 (-) True AMCG00020081
AMCG00020067 mRNA downstream 201477 8854816 ~ 8876263 (-) True AMCG00020067
AMCG00020066 mRNA downstream 250130 8812785 ~ 8827610 (-) False AMCG00020066
AMCG00020061 mRNA downstream 751365 8313813 ~ 8326375 (-) True AMCG00020061
AMCG00020082 mRNA upstream 32348 9115473 ~ 9127068 (-) True AMCG00020082
AMCG00020080 mRNA upstream 54608 9137733 ~ 9145085 (-) True AMCG00020080
AMCG00020083 mRNA upstream 62117 9145242 ~ 9148311 (-) True AMCG00020083
AMCG00020079 mRNA upstream 78881 9162006 ~ 9167067 (-) True AMCG00020079
AMCG00020084 mRNA upstream 86427 9169552 ~ 9193460 (-) True AMCG00020084
TU75987 other downstream 237795 8839211 ~ 8839945 (-) True G60746
TU75977 other downstream 249631 8814259 ~ 8828109 (-) True AMCG00020066
TU75693 other downstream 1515148 7440803 ~ 7562592 (-) True G60516
TU75494 other downstream 2606306 6468288 ~ 6471434 (-) True AMCG00020019
TU75492 other downstream 2611154 6463548 ~ 6466586 (-) False G60348
TU76536 other upstream 1672343 10755468 ~ 10756419 (-) True G61170
TU76663 other upstream 2612566 11695691 ~ 11701645 (-) True G61269
TU76919 other upstream 3401244 12484369 ~ 12486334 (-) False AMCG00020180
TU76921 other upstream 3401244 12484369 ~ 12496740 (-) False AMCG00020180
TU76915 other upstream 3407573 12490698 ~ 12504677 (-) False AMCG00020180

Expression Profile