RNA id: AMCG00020183


Basic Information

Item Value
RNA id AMCG00020183
length 1405
RNA type mRNA
GC content 0.59
exon number 10
gene id AMCG00020183
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12658313 ~ 12664512 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CGCTAAGGAAGTGAGCGGGGAACGGGGTTTTAAGTCGATAACCTCAggacatataaatatatgcacgtatttattttatttgatgtatttactTACATAAAGTGAATTAACCCAGACAAGCTCCCGGAAGCCCCGGGTACAACAGGGGGCCAGGAGATCATGGCTCTGTTGTTACGGGTGCAGTTCTCATGAGGTTGGCAGTGTTGGATGCATTGATTTGCTCCCAGGAGGAAGAGAGTAGCAGCACGACACACGCGTTATGAGAGGGGGCAGGATCAGAAGCTGGTTTGCTGGGTGTCTGCAGGATCTCTGGGCCGGTGTCGGTTTGTGAGTGGCCGAGATGAGAAGTGGAGTCAGGGGTTGATCTGGGGAGCAGCGGTTGGGGGTTTTACTAGCCTGAGCTCCAGGGGTGCATTGGTTCCTGTGCCTCCCATGCTGCACAGGAATGGGGAAGCTCCAGAGCAAATACAGATGCCGTTCGTCTGTGTACAGGGCAGTGACACGGGAAGAGGAGCCCCCTCCCACTCAGCAGGTGCTGCAGTACAGCCCCGCCCACACCGATATGGTCAACTCAGTGGCGCCTCTGAACTCTGACCTCTGTGTATCAGGAGGAGGTGATAAGCAGTTGGGCCCAAGCTGTGGCCCGGTGCAGCATGGGTCCACGACAGGAAATAGCCGAGGAGGGTCACCTCAGGGCGATGTCTCTTCTCTCCCCCAGGCAGTGGTGGTGTACGACTGGAGGATGGGCAAGCTGCAGCACAGGTTTCCAGGGCATCAGCGGGAGGTGACCAAGGTGGGCTGCCAGTATGGCTCCAGCAGACTGTTCAGCGCCTCCCGGGACCTGACTGTCCTGATGTGGGACCTGCATGGAGGGGACCAGCCTGTGCAAGAGTTCTGTGGGCACGACCTAGTGGTCAGTGGCCTGGCGGTCAGTCCAGATGGGTCCCAGCTCTGCACAGGGTCCCGGGACAACGCCCTGTGCCTGTGGGACGTGGAGTCAGGGGAGTGCCTGCTGAAGAATGCGATCTCCAGGAACCTGGTGACTCACCTATGCTGGGTGCCAGGAGGCTCTTGCGTCGTGCAGACATCAGAGGATAAGATGGTCAGCCACGGCTTTGGAGGACAGGGGTGTGAGGCCACACTGTGGGACTTGCGACAAACTGGCAGCAAGGTGTGCGAGTACAGGGGTCACCTGCAGTCCGCCACCTCCTGCCTCTTCCTGCCGCCTTCCCCGGGCAGCGCCCCAACCCTGGCCACCTCATCCCAAGACTGCTCTGTCAGGATCTGGGACCAGAACTCAGCAGGTTATGCCGGGCACCTGCTATGTGCCAGCTTCAACACGGGGATCCACCTGCTAAGTCTGCAGCTTGACCTGGCCCGCCTCTGCGAGACCGCACGCTTCTAA

Function

GO: NA

KEGG:

id description
K24743 WDR31; WD repeat-containing protein 31

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU76944 lncRNA downstream 74565 12578671 ~ 12583748 (-) True G61488
TU76926 lncRNA downstream 158887 12493801 ~ 12499426 (-) True G61477
TU76910 lncRNA downstream 206520 12430802 ~ 12451793 (-) True G61470
TU76846 lncRNA downstream 263285 12394285 ~ 12395028 (-) True G61424
TU76759 lncRNA downstream 656222 12001700 ~ 12002091 (-) False AMCG00020159
TU77020 lncRNA upstream 54855 12719367 ~ 12743437 (-) True G61550
TU77034 lncRNA upstream 140158 12804670 ~ 12805433 (-) True G61558
TU77095 lncRNA upstream 342910 13007422 ~ 13007666 (-) True G61593
TU77227 lncRNA upstream 672504 13337016 ~ 13338101 (-) True G61696
TU77271 lncRNA upstream 782490 13447002 ~ 13450062 (-) True G61729
AMCG00020186 mRNA downstream 11666 12641707 ~ 12646647 (-) True AMCG00020186
AMCG00020184 mRNA downstream 38499 12618600 ~ 12619814 (-) True AMCG00020184
AMCG00020185 mRNA downstream 60079 12597659 ~ 12598234 (-) True AMCG00020185
AMCG00020178 mRNA downstream 95329 12550570 ~ 12562984 (-) True AMCG00020178
AMCG00020179 mRNA downstream 128720 12516806 ~ 12529593 (-) True AMCG00020179
AMCG00020188 mRNA upstream 89345 12753857 ~ 12759226 (-) True AMCG00020188
AMCG00020190 mRNA upstream 97897 12762409 ~ 12766384 (-) True AMCG00020190
AMCG00020189 mRNA upstream 102153 12766665 ~ 12776416 (-) True AMCG00020189
AMCG00020193 mRNA upstream 117811 12782323 ~ 12790560 (-) True AMCG00020193
AMCG00020196 mRNA upstream 144962 12809474 ~ 12810528 (-) True AMCG00020196
TU76920 other downstream 148376 12500424 ~ 12509937 (-) False AMCG00020180
TU76915 other downstream 153636 12490698 ~ 12504677 (-) False AMCG00020180
TU77089 other upstream 333326 12997838 ~ 12998223 (-) True G61589
TU77151 other upstream 557088 13221600 ~ 13224510 (-) True AMCG00020212
TU77373 other upstream 931006 13595518 ~ 13596917 (-) True AMCG00020230
TU77394 other upstream 999575 13664087 ~ 13665585 (-) False AMCG00020229
TU77536 other upstream 1140508 13805020 ~ 13808333 (-) True AMCG00020252

Expression Profile