RNA id: AMCG00020202


Basic Information

Item Value
RNA id AMCG00020202
length 360
RNA type mRNA
GC content 0.58
exon number 3
gene id AMCG00020202
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13034089 ~ 13038065 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCAGAGTCAAAGTCATTGTGCAGCTAGCCAGTCACTTCAGCACTGCGGACAGCGGACTGCAGGGGGCGCTGTCTCCATTCTGCTGGGCTCCCAGGCTGCCAAGCCTCACAGCCACTTGATAACTGTGTGCAGGATCGGGGGACTGAGAAAGTGCCCGTGCCAGGAGTGGGAGCTGCAGCTGTGCTGCGATGAGTGCTGGTGTTTAGTGTTGCCTATCAACCTGGAGGCCCAGAGAAACACTTTGGAAGTTTTAATGGAGCGTGCCCGTCCCAGGAGCCAGTGCAGCCACACTGAGGATGGATGCCGAGAGCAGGGATTCTGGCCACTGTTGGGGCAGACTTTGACCTTCGAACACTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU77095 lncRNA downstream 26423 13007422 ~ 13007666 (-) True G61593
TU77034 lncRNA downstream 228656 12804670 ~ 12805433 (-) True G61558
TU77020 lncRNA downstream 290652 12719367 ~ 12743437 (-) True G61550
TU76944 lncRNA downstream 450341 12578671 ~ 12583748 (-) True G61488
TU76926 lncRNA downstream 534663 12493801 ~ 12499426 (-) True G61477
TU77227 lncRNA upstream 298951 13337016 ~ 13338101 (-) True G61696
TU77271 lncRNA upstream 408937 13447002 ~ 13450062 (-) True G61729
TU77364 lncRNA upstream 540344 13578409 ~ 13653379 (-) True G61803
TU77451 lncRNA upstream 713019 13751084 ~ 13751298 (-) True G61872
TU77532 lncRNA upstream 751326 13789391 ~ 13792931 (-) True G61920
AMCG00020201 mRNA downstream 380 13029669 ~ 13033709 (-) True AMCG00020201
AMCG00020200 mRNA downstream 16380 12929785 ~ 13017709 (-) True AMCG00020200
AMCG00020197 mRNA downstream 135832 12889641 ~ 12898257 (-) True AMCG00020197
AMCG00020198 mRNA downstream 146228 12880664 ~ 12887861 (-) True AMCG00020198
AMCG00020194 mRNA downstream 207067 12818930 ~ 12827022 (-) True AMCG00020194
AMCG00020199 mRNA upstream 37653 13075718 ~ 13079535 (-) True AMCG00020199
AMCG00020203 mRNA upstream 45564 13083629 ~ 13083952 (-) True AMCG00020203
AMCG00020204 mRNA upstream 54498 13092563 ~ 13110839 (-) True AMCG00020204
AMCG00020205 mRNA upstream 101107 13139172 ~ 13163646 (-) True AMCG00020205
AMCG00020210 mRNA upstream 132921 13170986 ~ 13180186 (-) True AMCG00020210
TU77089 other downstream 35866 12997838 ~ 12998223 (-) True G61589
TU76920 other downstream 524152 12500424 ~ 12509937 (-) False AMCG00020180
TU76916 other downstream 537349 12490698 ~ 12496740 (-) False AMCG00020180
TU77151 other upstream 183535 13221600 ~ 13224510 (-) True AMCG00020212
TU77373 other upstream 557453 13595518 ~ 13596917 (-) True AMCG00020230
TU77394 other upstream 626022 13664087 ~ 13665585 (-) False AMCG00020229
TU77536 other upstream 766955 13805020 ~ 13808333 (-) True AMCG00020252
TU77538 other upstream 766955 13805020 ~ 13808333 (-) False AMCG00020252