RNA id: AMCG00020230


Basic Information

Item Value
RNA id AMCG00020230
length 408
RNA type mRNA
GC content 0.68
exon number 1
gene id AMCG00020230
representative False

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13595518 ~ 13596917 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGGGTGCTGTCAGGCCTGGCGCAGGGCCTGGTGCGGGGGGCGGACCGCATGGCCCAGTTCACCAGCAAGCGAGGCCCGCGGACCTTCTACAAGGGCCGGGGTGCGCGCAGGACAGGCGTGCTGACCAGCAGCGGTAAGTTCCTGCGCCTGCCTGCCATGGTGCCCCAGCTGGTTGTGCCGCTGATGGAGGGGTTCCGGCTCAAGCCCTACGTGTCATACCGTGCCCCCACAGGCTCTGagccccccctcacccccaagGCGCTGTTCACCCAGACCGTGGCTCCTGCCGTGGAGCGCGACCTGCGCGAGGGCCGCTTCCACCCCCAGGAGCTGGAGCGCTATGGGTTCGAGCCCTCACAGGATGGCAAGCTGTTCAAGCTGTACCCCAAGAACTACGTTCGCTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU77271 lncRNA downstream 145638 13447002 ~ 13450062 (-) True G61729
TU77227 lncRNA downstream 257599 13337016 ~ 13338101 (-) True G61696
TU77095 lncRNA downstream 588034 13007422 ~ 13007666 (-) True G61593
TU77034 lncRNA downstream 790267 12804670 ~ 12805433 (-) True G61558
TU77020 lncRNA downstream 852263 12719367 ~ 12743437 (-) True G61550
TU77451 lncRNA upstream 154977 13751084 ~ 13751298 (-) True G61872
TU77532 lncRNA upstream 193284 13789391 ~ 13792931 (-) True G61920
TU77540 lncRNA upstream 215864 13811971 ~ 13813003 (-) False AMCG00020256
TU77542 lncRNA upstream 215864 13811971 ~ 13813003 (-) False AMCG00020256
TU77549 lncRNA upstream 225641 13821748 ~ 13823540 (-) True G61927
AMCG00020224 mRNA downstream 6772 13586380 ~ 13588928 (-) True AMCG00020224
AMCG00020220 mRNA downstream 124844 13469810 ~ 13470856 (-) True AMCG00020220
AMCG00020219 mRNA downstream 168289 13408705 ~ 13427411 (-) True AMCG00020219
AMCG00020221 mRNA downstream 192460 13400114 ~ 13403240 (-) True AMCG00020221
AMCG00020216 mRNA downstream 207703 13368648 ~ 13387997 (-) True AMCG00020216
AMCG00020231 mRNA upstream 54482 13650589 ~ 13663220 (-) True AMCG00020231
AMCG00020229 mRNA upstream 67969 13664076 ~ 13665592 (-) True AMCG00020229
AMCG00020237 mRNA upstream 76188 13672295 ~ 13684406 (-) True AMCG00020237
AMCG00020236 mRNA upstream 94820 13690927 ~ 13702190 (-) True AMCG00020236
AMCG00020235 mRNA upstream 112709 13708816 ~ 13710669 (-) True AMCG00020235
TU77151 other downstream 371190 13221600 ~ 13224510 (-) True AMCG00020212
TU77089 other downstream 597477 12997838 ~ 12998223 (-) True G61589
TU76920 other downstream 1085763 12500424 ~ 12509937 (-) False AMCG00020180
TU76923 other downstream 1098960 12490698 ~ 12496740 (-) False AMCG00020180
TU76917 other downstream 1103135 12490698 ~ 12492565 (-) False AMCG00020180
TU77394 other upstream 67980 13664087 ~ 13665585 (-) False AMCG00020229
TU77536 other upstream 208913 13805020 ~ 13808333 (-) True AMCG00020252
TU77538 other upstream 208913 13805020 ~ 13808333 (-) False AMCG00020252
TU77648 other upstream 533571 14129678 ~ 14131569 (-) True G62011
TU77709 other upstream 734415 14330522 ~ 14332407 (-) True G62061

Expression Profile