RNA id: AMCG00020266



Basic Information


Item Value
RNA id AMCG00020266
length 354
RNA type mRNA
GC content 0.62
exon number 2
gene id AMCG00020266
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 14052358 ~ 14055730 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCAGCGAGCAGCAGGGTTCAGACACTCCTTCGCTGGGCCTGGGCCTGTTCATGTGGAAGCCCTGGAGAGCATCAGCGTCGAGGATTCTGAGTCCCTGGACAGCTGCATCCAGAGCACCCTCTCTGCGCTGTACCCACCGTTCGAGGCCACCGCGGCCACGGTGCTCTGCCAGGTGTTTGATGTGGTGGAGAAGACGTACTGCGGAGACGGGCTGCGCTACCTCATCGACTTCCTGGTCCCTGCCAAGCACATTCTCCAGTGCATTCAGCAGGATGCCTGCGTGAGTACTCTCACTGCCTCCGCACAGCCAGGACACAGCGGCTGCAGCAGCACGCTGTACAAGCAGGGGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU77505 lncRNA upstream 121618 13877311 ~ 13930740 (+) True G61904
TU77495 lncRNA upstream 161930 13888151 ~ 13890428 (+) True G61895
TU77507 lncRNA upstream 167242 13882825 ~ 13885116 (+) True AMCG00020241
TU77473 lncRNA upstream 259414 13789762 ~ 13792944 (+) True AMCG00020245
TU77450 lncRNA upstream 300995 13751087 ~ 13751363 (+) True G61871
TU77649 lncRNA downstream 79568 14135298 ~ 14136287 (+) True G62012
TU77650 lncRNA downstream 80690 14136420 ~ 14136936 (+) True G62013
TU77651 lncRNA downstream 81696 14137426 ~ 14137829 (+) True G62014
TU77670 lncRNA downstream 140054 14195784 ~ 14218381 (+) False AMCG00020273
TU77683 lncRNA downstream 186135 14241865 ~ 14288834 (+) True G62039
AMCG00020263 mRNA upstream 30031 14000227 ~ 14022327 (+) True AMCG00020263
AMCG00020264 mRNA upstream 57219 13988080 ~ 13995139 (+) True AMCG00020264
AMCG00020262 mRNA upstream 76799 13973414 ~ 13975559 (+) True AMCG00020262
AMCG00020265 mRNA upstream 96291 13954487 ~ 13956067 (+) True AMCG00020265
AMCG00020267 mRNA upstream 102375 13949642 ~ 13949983 (+) False AMCG00020267
AMCG00020268 mRNA downstream 29403 14085133 ~ 14098649 (+) True AMCG00020268
AMCG00020273 mRNA downstream 150477 14206207 ~ 14232268 (+) True AMCG00020273
AMCG00020271 mRNA downstream 201842 14257572 ~ 14259160 (+) True AMCG00020271
AMCG00020272 mRNA downstream 206252 14261982 ~ 14272204 (+) True AMCG00020272
AMCG00020277 mRNA downstream 239003 14294733 ~ 14302999 (+) True AMCG00020277
TU77582 other upstream 101311 13948426 ~ 13951047 (+) True AMCG00020267
TU77503 other upstream 185795 13863477 ~ 13866563 (+) True AMCG00020255
TU77491 other upstream 217526 13833170 ~ 13834832 (+) True G61894
TU77200 other upstream 701646 13349677 ~ 13350712 (+) True G61675
TU76948 other upstream 1432541 12615792 ~ 12619817 (+) True G61491
TU77751 other downstream 412070 14467800 ~ 14469300 (+) True AMCG00020281
TU78405 other downstream 2758644 16814374 ~ 16815857 (+) True G62632
TU78611 other downstream 3403430 17459160 ~ 17471869 (+) True AMCG00020371
TU78735 other downstream 3872598 17928328 ~ 17928904 (+) True G62895
TU78775 other downstream 4002828 18058558 ~ 18061864 (+) True AMCG00020408

Expression Profile