RNA id: TU77670



Basic Information


Item Value
RNA id TU77670
length 390
lncRNA type sense_over
GC content 0.62
exon number 2
gene id AMCG00020273
representative False

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 14195784 ~ 14232268 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGAGATGGCGGTTCGAATCCAGGCAGGGGCTCTGGGCGCACTATAGTACTACCTAGCCATGCACCCCACTGGAGTAAACTGCACCTGCTGCACAAGGATGGGTCTGAAACAGCTGGGCCGCACGAGTACTGACCTCTGACGGTGACATGCAGAATGACAGGCAAGATTTGAAAAGGGTGTGACTCCGGGTTCGGGAAGGCGGCAGCCCTACAACTGGATGCTCTGGGATTCGAGGTGTTCGCCAGTGTCCTGGACCCTGCCGGGTCAGGGGCAACTGAGCTGCGGCGCCGCTGCTCCCCTCGTCTCACCGTGCTGCGCATGGACATCACCAAACCACAGGAGGTGCAGGACGCCCTGCACTGCACCAGAGCCAGGCTCGGGCCCCAGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU77651 lncRNA upstream 57955 14137426 ~ 14137829 (+) True G62014
TU77650 lncRNA upstream 58848 14136420 ~ 14136936 (+) True G62013
TU77649 lncRNA upstream 59497 14135298 ~ 14136287 (+) True G62012
TU77505 lncRNA upstream 265044 13877311 ~ 13930740 (+) True G61904
TU77683 lncRNA downstream 23484 14241865 ~ 14288834 (+) True G62039
TU77711 lncRNA downstream 126915 14345296 ~ 14401302 (+) True G62062
TU77769 lncRNA downstream 336475 14554856 ~ 14621700 (+) True G62108
TU77775 lncRNA downstream 348338 14566719 ~ 14567438 (+) True G62114
TU77779 lncRNA downstream 359126 14577507 ~ 14578702 (+) True G62118
AMCG00020268 mRNA upstream 97135 14085133 ~ 14098649 (+) True AMCG00020268
AMCG00020266 mRNA upstream 140054 14052358 ~ 14055730 (+) True AMCG00020266
AMCG00020263 mRNA upstream 173457 14000227 ~ 14022327 (+) True AMCG00020263
AMCG00020264 mRNA upstream 200645 13988080 ~ 13995139 (+) True AMCG00020264
AMCG00020262 mRNA upstream 220225 13973414 ~ 13975559 (+) True AMCG00020262
AMCG00020271 mRNA downstream 39191 14257572 ~ 14259160 (+) True AMCG00020271
AMCG00020272 mRNA downstream 43601 14261982 ~ 14272204 (+) True AMCG00020272
AMCG00020277 mRNA downstream 76352 14294733 ~ 14302999 (+) True AMCG00020277
AMCG00020275 mRNA downstream 96011 14314392 ~ 14332409 (+) True AMCG00020275
AMCG00020276 mRNA downstream 121454 14339835 ~ 14383230 (+) True AMCG00020276
TU77582 other upstream 244737 13948426 ~ 13951047 (+) True AMCG00020267
TU77503 other upstream 329221 13863477 ~ 13866563 (+) True AMCG00020255
TU77491 other upstream 360952 13833170 ~ 13834832 (+) True G61894
TU77200 other upstream 845072 13349677 ~ 13350712 (+) True G61675
TU76948 other upstream 1575967 12615792 ~ 12619817 (+) True G61491
TU77751 other downstream 249419 14467800 ~ 14469300 (+) True AMCG00020281
TU78405 other downstream 2595993 16814374 ~ 16815857 (+) True G62632
TU78611 other downstream 3240779 17459160 ~ 17471869 (+) True AMCG00020371
TU78735 other downstream 3709947 17928328 ~ 17928904 (+) True G62895
TU78775 other downstream 3840177 18058558 ~ 18061864 (+) True AMCG00020408

Expression Profile