Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00020297 |
| length | 882 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 9 |
| gene id | AMCG00020297 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 15235683 ~ 15244984 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006915 | apoptotic process | biological_process |
| GO:0008152 | metabolic process | biological_process |
| GO:0007032 | endosome organization | biological_process |
| GO:0007040 | lysosome organization | biological_process |
| GO:0015031 | protein transport | biological_process |
| GO:0008333 | endosome to lysosome transport | biological_process |
| GO:0045022 | early endosome to late endosome transport | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0070695 | FHF complex | cellular_component |
| GO:0016881 | acid-amino acid ligase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU77862 | lncRNA | upstream | 201600 | 15032042 ~ 15034083 (+) | True | G62185 |
| TU77769 | lncRNA | upstream | 613983 | 14554856 ~ 14621700 (+) | True | G62108 |
| TU77779 | lncRNA | upstream | 656981 | 14577507 ~ 14578702 (+) | True | G62118 |
| TU77775 | lncRNA | upstream | 668245 | 14566719 ~ 14567438 (+) | True | G62114 |
| TU77711 | lncRNA | upstream | 834381 | 14345296 ~ 14401302 (+) | True | G62062 |
| TU77943 | lncRNA | downstream | 52763 | 15297747 ~ 15298181 (+) | True | G62251 |
| TU77981 | lncRNA | downstream | 88700 | 15333684 ~ 15335056 (+) | True | G62275 |
| TU77989 | lncRNA | downstream | 178223 | 15423207 ~ 15423573 (+) | True | G62282 |
| TU78095 | lncRNA | downstream | 819111 | 16064095 ~ 16066816 (+) | True | G62368 |
| TU78128 | lncRNA | downstream | 854002 | 16098986 ~ 16100810 (+) | True | G62398 |
| AMCG00020295 | mRNA | upstream | 17653 | 15212090 ~ 15218030 (+) | True | AMCG00020295 |
| AMCG00020296 | mRNA | upstream | 36391 | 15166014 ~ 15199292 (+) | True | AMCG00020296 |
| AMCG00020298 | mRNA | upstream | 69689 | 15160597 ~ 15165994 (+) | True | AMCG00020298 |
| AMCG00020291 | mRNA | upstream | 244232 | 14990708 ~ 14991451 (+) | True | AMCG00020291 |
| AMCG00020292 | mRNA | upstream | 245253 | 14989030 ~ 14990430 (+) | True | AMCG00020292 |
| AMCG00020299 | mRNA | downstream | 38 | 15245022 ~ 15247620 (+) | True | AMCG00020299 |
| AMCG00020304 | mRNA | downstream | 197927 | 15442911 ~ 15496323 (+) | True | AMCG00020304 |
| AMCG00020306 | mRNA | downstream | 515101 | 15760085 ~ 15770745 (+) | True | AMCG00020306 |
| AMCG00020305 | mRNA | downstream | 526031 | 15771015 ~ 15778141 (+) | True | AMCG00020305 |
| AMCG00020307 | mRNA | downstream | 657528 | 15902512 ~ 15908316 (+) | True | AMCG00020307 |
| TU77751 | other | upstream | 766383 | 14467800 ~ 14469300 (+) | True | AMCG00020281 |
| TU77582 | other | upstream | 1284636 | 13948426 ~ 13951047 (+) | True | AMCG00020267 |
| TU77503 | other | upstream | 1369120 | 13863477 ~ 13866563 (+) | True | AMCG00020255 |
| TU77491 | other | upstream | 1400851 | 13833170 ~ 13834832 (+) | True | G61894 |
| TU77200 | other | upstream | 1884971 | 13349677 ~ 13350712 (+) | True | G61675 |
| TU78405 | other | downstream | 1569390 | 16814374 ~ 16815857 (+) | True | G62632 |
| TU78611 | other | downstream | 2214176 | 17459160 ~ 17471869 (+) | True | AMCG00020371 |
| TU78735 | other | downstream | 2683344 | 17928328 ~ 17928904 (+) | True | G62895 |
| TU78775 | other | downstream | 2813574 | 18058558 ~ 18061864 (+) | True | AMCG00020408 |
| TU78779 | other | downstream | 2822803 | 18067787 ~ 18072043 (+) | True | AMCG00020407 |
