Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00020324 |
| length | 1160 |
| RNA type | mRNA |
| GC content | 0.63 |
| exon number | 8 |
| gene id | AMCG00020324 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 16474273 ~ 16479633 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016485 | protein processing | biological_process |
| GO:0016558 | protein import into peroxisome matrix | biological_process |
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins | biological_process |
| GO:0005782 | peroxisomal matrix | cellular_component |
| GO:0009295 | nucleoid | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0004176 | ATP-dependent peptidase activity | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU77990 | lncRNA | downstream | 1050699 | 15423155 ~ 15423574 (-) | True | G62283 |
| TU77869 | lncRNA | downstream | 1440197 | 15032135 ~ 15034076 (-) | True | G62191 |
| TU77815 | lncRNA | downstream | 1706710 | 14703511 ~ 14767563 (-) | True | G62143 |
| TU77717 | lncRNA | downstream | 2072971 | 14345297 ~ 14401302 (-) | False | G62066 |
| TU78228 | lncRNA | upstream | 897 | 16480530 ~ 16480990 (-) | True | G62475 |
| TU78317 | lncRNA | upstream | 136690 | 16616323 ~ 16617421 (-) | False | AMCG00020336 |
| TU78318 | lncRNA | upstream | 136761 | 16616394 ~ 16617421 (-) | False | AMCG00020336 |
| TU78319 | lncRNA | upstream | 136761 | 16616394 ~ 16617579 (-) | False | AMCG00020336 |
| TU78347 | lncRNA | upstream | 189264 | 16668897 ~ 16669511 (-) | True | G62580 |
| AMCG00020325 | mRNA | downstream | 611 | 16472584 ~ 16473662 (-) | True | AMCG00020325 |
| AMCG00020323 | mRNA | downstream | 4986 | 16457579 ~ 16469287 (-) | True | AMCG00020323 |
| AMCG00020316 | mRNA | downstream | 371593 | 16099146 ~ 16102680 (-) | False | AMCG00020316 |
| AMCG00020317 | mRNA | downstream | 376720 | 16088956 ~ 16097553 (-) | True | AMCG00020317 |
| AMCG00020313 | mRNA | downstream | 395568 | 16067413 ~ 16078705 (-) | True | AMCG00020313 |
| AMCG00020328 | mRNA | upstream | 55063 | 16534696 ~ 16548548 (-) | True | AMCG00020328 |
| AMCG00020329 | mRNA | upstream | 78909 | 16558542 ~ 16569600 (-) | True | AMCG00020329 |
| AMCG00020337 | mRNA | upstream | 125983 | 16605616 ~ 16614656 (-) | True | AMCG00020337 |
| AMCG00020336 | mRNA | upstream | 137941 | 16617574 ~ 16624970 (-) | True | AMCG00020336 |
| AMCG00020333 | mRNA | upstream | 145605 | 16625238 ~ 16631859 (-) | True | AMCG00020333 |
| TU78161 | other | downstream | 198700 | 16272451 ~ 16275573 (-) | True | G62421 |
| TU78153 | other | downstream | 219154 | 16252788 ~ 16255119 (-) | True | G62415 |
| TU78145 | other | downstream | 354120 | 16118989 ~ 16120153 (-) | True | G62409 |
| TU78130 | other | downstream | 371534 | 16098900 ~ 16102739 (-) | False | AMCG00020316 |
| TU78391 | other | upstream | 313233 | 16792866 ~ 16793167 (-) | True | G62618 |
| TU78680 | other | upstream | 1131031 | 17610664 ~ 17626189 (-) | True | G62853 |
| TU78823 | other | upstream | 1514911 | 17994544 ~ 17997017 (-) | False | AMCG00020403 |
| TU78814 | other | upstream | 1526535 | 18006168 ~ 18015860 (-) | True | G62961 |
| TU78822 | other | upstream | 1557409 | 18037042 ~ 18039960 (-) | False | G62961 |
