RNA id: AMCG00020369



Basic Information


Item Value
RNA id AMCG00020369
length 498
RNA type mRNA
GC content 0.60
exon number 2
gene id AMCG00020369
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 17339756 ~ 17340976 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCGTTCCAGACGTGGGCGGCTCCACCAGCTCTCCTCCAAGTTTGAAGCGGAGTACCGGCGGTTCGCACTGAAGCGCTCTGGTGCGGGGGGCTTCCAGGAGTTCTACCACCTCCTGCAATCCGTGCACCAGATCCCCTGCCTGGACGTCCTGCTGGGCTATACTGACGTGCACGGAGACCTGCTGCCAATCAACAATGATGACAACTTCCAGAAAGCCCTGTCCTCGGCCAATCCGCTGCTCAGGATCATCATCCAGAAGAGAGGTAAGACCCTGCCGGTGCTGTGGGAcgaggggaggggtggggggtgtggaGGGTGGTCTAGAGGAGGGTGGTGGGAAGGCATGGCAGACCAGGTCCGTTCTTTGATTGCTGCTGGTATGCTAGTGCtgctcgctccctctctcccttgtCCTCCTGGGCAAATGCTGCAAGCGCTCAGGCGAGTGGTGGCATTGGAGGTTCCTGGCGTCGAGAGGTTTGACTTTGAGTTGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU78471 lncRNA upstream 293606 17030193 ~ 17046150 (+) True G62681
TU78470 lncRNA upstream 304258 17031817 ~ 17035498 (+) True G62680
TU78429 lncRNA upstream 350177 16987319 ~ 16989579 (+) True G62654
TU78390 lncRNA upstream 545876 16793664 ~ 16793880 (+) True G62617
TU78329 lncRNA upstream 693495 16644938 ~ 16646261 (+) True G62564
TU78590 lncRNA downstream 63409 17404385 ~ 17503263 (+) True G62781
TU78603 lncRNA downstream 92666 17433642 ~ 17434200 (+) False AMCG00020370
TU78749 lncRNA downstream 613347 17954323 ~ 17955274 (+) True G62909
TU78758 lncRNA downstream 640057 17981033 ~ 17983521 (+) True G62912
TU78763 lncRNA downstream 646872 17987848 ~ 18032139 (+) True G62916
AMCG00020366 mRNA upstream 22838 17276550 ~ 17316918 (+) True AMCG00020366
AMCG00020364 mRNA upstream 68224 17261682 ~ 17271532 (+) True AMCG00020364
AMCG00020365 mRNA upstream 80799 17237808 ~ 17258957 (+) True AMCG00020365
AMCG00020361 mRNA upstream 150505 17180941 ~ 17189251 (+) True AMCG00020361
AMCG00020362 mRNA upstream 160730 17176514 ~ 17179026 (+) True AMCG00020362
AMCG00020368 mRNA downstream 23482 17364458 ~ 17365614 (+) True AMCG00020368
AMCG00020377 mRNA downstream 44180 17385156 ~ 17385546 (+) True AMCG00020377
AMCG00020370 mRNA downstream 92689 17433665 ~ 17442711 (+) True AMCG00020370
AMCG00020376 mRNA downstream 111952 17452928 ~ 17453764 (+) True AMCG00020376
AMCG00020371 mRNA downstream 118168 17459144 ~ 17469465 (+) False AMCG00020371
TU78405 other upstream 523899 16814374 ~ 16815857 (+) True G62632
TU77751 other upstream 2870456 14467800 ~ 14469300 (+) True AMCG00020281
TU77582 other upstream 3388709 13948426 ~ 13951047 (+) True AMCG00020267
TU77503 other upstream 3473193 13863477 ~ 13866563 (+) True AMCG00020255
TU77491 other upstream 3504924 13833170 ~ 13834832 (+) True G61894
TU78611 other downstream 118184 17459160 ~ 17471869 (+) True AMCG00020371
TU78735 other downstream 587352 17928328 ~ 17928904 (+) True G62895
TU78775 other downstream 717582 18058558 ~ 18061864 (+) True AMCG00020408
TU78779 other downstream 726811 18067787 ~ 18072043 (+) True AMCG00020407
TU78921 other downstream 991593 18332569 ~ 18334032 (+) True G63045

Expression Profile