RNA id: AMCG00020390



Basic Information


Item Value
RNA id AMCG00020390
length 276
RNA type mRNA
GC content 0.51
exon number 2
gene id AMCG00020390
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 17805531 ~ 17810647 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GACTATGTGCACCAGTTGATTTgcatcacagagagagagaagtttgAGGTGCCAGTAAGATCCATTGGGGCACGAGCAATCCTGGACTTCCCAGATCATCTGAACTTTTCTGTCTGTCCGGTGAAGTGTTCCTCCCAGAAGACCCTGCTGGTGCGCAACATTGGGAACAGCGAAGCCCGATTCCGCCTCAGCACAGAGAGTATGCAGGTGACTGTGGACTTCCATCCCAAGACTACAGGAGACTACTCCAGGGATCTCGTGTTACACTTCGATACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU78578 lncRNA downstream 435085 17364823 ~ 17370446 (-) True G62770
TU78515 lncRNA downstream 629696 17120154 ~ 17175835 (-) False G62715
TU78513 lncRNA downstream 629696 17172569 ~ 17175835 (-) True G62715
TU78464 lncRNA downstream 785979 17018790 ~ 17019552 (-) True G62675
TU78445 lncRNA downstream 814817 16990267 ~ 16990714 (-) True G62660
TU78718 lncRNA upstream 37511 17848158 ~ 17851113 (-) True G62880
TU78802 lncRNA upstream 157586 17968233 ~ 17969691 (-) True G62951
TU78844 lncRNA upstream 326833 18137480 ~ 18138298 (-) True G62981
TU78888 lncRNA upstream 373361 18184008 ~ 18186050 (-) True G63015
TU78936 lncRNA upstream 547178 18357825 ~ 18358910 (-) True G63057
AMCG00020391 mRNA downstream 11032 17775984 ~ 17794499 (-) True AMCG00020391
AMCG00020392 mRNA downstream 43651 17708113 ~ 17761880 (-) True AMCG00020392
AMCG00020385 mRNA downstream 131856 17659861 ~ 17673675 (-) True AMCG00020385
AMCG00020382 mRNA downstream 246436 17549751 ~ 17559095 (-) True AMCG00020382
AMCG00020373 mRNA downstream 353733 17443485 ~ 17451798 (-) True AMCG00020373
AMCG00020389 mRNA upstream 2668 17813315 ~ 17816888 (-) True AMCG00020389
AMCG00020397 mRNA upstream 115865 17926512 ~ 17930590 (-) True AMCG00020397
AMCG00020398 mRNA upstream 139687 17950334 ~ 17955926 (-) True AMCG00020398
AMCG00020400 mRNA upstream 170748 17981395 ~ 17984641 (-) True AMCG00020400
AMCG00020403 mRNA upstream 176534 17987181 ~ 18015862 (-) True AMCG00020403
TU78680 other downstream 179342 17610664 ~ 17626189 (-) True G62853
TU78391 other downstream 1012364 16792866 ~ 16793167 (-) True G62618
TU78161 other downstream 1529958 16272451 ~ 16275573 (-) True G62421
TU78153 other downstream 1550412 16252788 ~ 16255119 (-) True G62415
TU78145 other downstream 1685378 16118989 ~ 16120153 (-) True G62409
TU78823 other upstream 183897 17994544 ~ 17997017 (-) False AMCG00020403
TU78814 other upstream 195521 18006168 ~ 18015860 (-) True G62961
TU78822 other upstream 226395 18037042 ~ 18039960 (-) False G62961
TU79413 other upstream 3501555 21312202 ~ 21312605 (-) True G63464
TU79676 other upstream 4733195 22543842 ~ 22544689 (-) True G63679

Expression Profile