RNA id: AMCG00020430



Basic Information


Item Value
RNA id AMCG00020430
length 282
RNA type mRNA
GC content 0.50
exon number 4
gene id AMCG00020430
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 18671902 ~ 18680796 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAGACGGTGGAGAAAGAGTGTGGAGCTCTGGGTGGGCTTTTTCAGGCGATCGTCAATGATATGAAGAGCTCCTATCCCATCTGGGAAGACTTCAGTGCTAAGGCTACCAAACTGCACTCTCAACTGAGGACCACTGTGCTGGCTGCTGTGGCTTTTCTGGATGCCTTCCAGAAAGTGGCCGACATGGCGACCAATACCAGAGTCAAAATTTGCTTCTTGGCTTTAACTCCTTCCCCCGTCTATGAGAAGAACACTGATGCTCCTCCAATCTATCTGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU78983 lncRNA upstream 230983 18438202 ~ 18440919 (+) True G63097
TU78952 lncRNA upstream 277596 18394101 ~ 18394306 (+) True G63069
TU78951 lncRNA upstream 278596 18393066 ~ 18393306 (+) True G63068
TU78938 lncRNA upstream 311409 18360275 ~ 18360493 (+) True G63058
TU78865 lncRNA upstream 460873 18210769 ~ 18211029 (+) True G62994
TU79125 lncRNA downstream 602162 19282958 ~ 19283173 (+) True G63203
TU79130 lncRNA downstream 645799 19326595 ~ 19329495 (+) True G63208
TU79131 lncRNA downstream 681076 19361872 ~ 19363484 (+) True G63209
TU79174 lncRNA downstream 949478 19630274 ~ 19630567 (+) True G63248
TU79186 lncRNA downstream 972428 19653224 ~ 19654272 (+) True G63259
AMCG00020428 mRNA upstream 3262 18625968 ~ 18668640 (+) True AMCG00020428
AMCG00020427 mRNA upstream 54230 18609769 ~ 18617672 (+) True AMCG00020427
AMCG00020426 mRNA upstream 135809 18530178 ~ 18536093 (+) True AMCG00020426
AMCG00020425 mRNA upstream 149046 18510463 ~ 18522856 (+) True AMCG00020425
AMCG00020419 mRNA upstream 273171 18395857 ~ 18398731 (+) True AMCG00020419
AMCG00020429 mRNA downstream 27010 18707806 ~ 18727969 (+) True AMCG00020429
AMCG00020432 mRNA downstream 84722 18765518 ~ 18769425 (+) True AMCG00020432
AMCG00020431 mRNA downstream 102475 18783271 ~ 18863273 (+) True AMCG00020431
AMCG00020436 mRNA downstream 488516 19169312 ~ 19173385 (+) True AMCG00020436
AMCG00020439 mRNA downstream 916407 19597203 ~ 19602324 (+) True AMCG00020439
TU78921 other upstream 337870 18332569 ~ 18334032 (+) True G63045
TU78779 other upstream 599859 18067787 ~ 18072043 (+) True AMCG00020407
TU78775 other upstream 610038 18058558 ~ 18061864 (+) True AMCG00020408
TU78735 other upstream 742998 17928328 ~ 17928904 (+) True G62895
TU78611 other upstream 1200033 17459160 ~ 17471869 (+) True AMCG00020371
TU79166 other downstream 916442 19597238 ~ 19600737 (+) False AMCG00020439
TU79182 other downstream 950529 19631325 ~ 19636221 (+) True AMCG00020438
TU79495 other downstream 3454572 22135368 ~ 22142157 (+) True AMCG00020470
TU79558 other downstream 3678032 22358828 ~ 22372760 (+) False AMCG00020487
TU79808 other downstream 4389615 23070411 ~ 23074945 (+) True G63786

Expression Profile