RNA id: AMCG00020692


Basic Information

Item Value
RNA id AMCG00020692
length 300
RNA type mRNA
GC content 0.57
exon number 3
gene id AMCG00020692
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 30128219 ~ 30145527 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGACATTCCCATTTTTGTCAGCAATCCTCCCTTTAGCAGAACTCTACCTGCAGGCGTATCCCAGCGCTGCCGTCGTGTTGCCAAAGAGCTCTTTTGCCGTCAGTGGCgcgCAACAAGGGGCCGCCACCACGGTGTACTGCGCAGTTGCGGACGAACTGGAAGGCCTGGGAGGGATGTACTTCAACAACTGTTTTCGCTGCCTGCCTTCACAGGAAGCTCAGAGCGAGACCACGGCCGCGTCCTTGTGGCAACTGAGTGAGCGGCTGATCCAGGAGAGAGTTGGCAGACAGTCCCTCTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU81342 lncRNA downstream 144854 29983113 ~ 29983365 (-) True G65033
TU81330 lncRNA downstream 242320 29885601 ~ 29885899 (-) True G65023
TU81290 lncRNA downstream 814160 29259557 ~ 29314059 (-) True G64991
TU81188 lncRNA downstream 1126586 28996392 ~ 29001633 (-) True G64912
TU81189 lncRNA downstream 1128687 28996392 ~ 28999532 (-) False G64912
TU81361 lncRNA upstream 389765 30535292 ~ 30535896 (-) True G65050
TU81372 lncRNA upstream 471353 30616880 ~ 30617134 (-) True G65061
TU81379 lncRNA upstream 527218 30672745 ~ 30672962 (-) True G65068
TU81382 lncRNA upstream 547621 30693148 ~ 30693367 (-) True G65071
TU81384 lncRNA upstream 554959 30700486 ~ 30702173 (-) True G65073
AMCG00020685 mRNA downstream 595132 29520191 ~ 29533087 (-) True AMCG00020685
AMCG00020686 mRNA downstream 623807 29487288 ~ 29504412 (-) True AMCG00020686
AMCG00020680 mRNA downstream 660198 29464875 ~ 29468021 (-) True AMCG00020680
AMCG00020682 mRNA downstream 670568 29418816 ~ 29457651 (-) True AMCG00020682
AMCG00020681 mRNA downstream 759823 29336704 ~ 29368396 (-) True AMCG00020681
AMCG00020693 mRNA upstream 219493 30365020 ~ 30420634 (-) True AMCG00020693
AMCG00020694 mRNA upstream 304218 30449745 ~ 30530820 (-) False AMCG00020694
AMCG00020700 mRNA upstream 577256 30722783 ~ 30737976 (-) False AMCG00020700
AMCG00020699 mRNA upstream 612599 30758126 ~ 30760083 (-) True AMCG00020699
AMCG00020702 mRNA upstream 655055 30800582 ~ 30805327 (-) True AMCG00020702
TU81316 other downstream 595102 29529919 ~ 29533117 (-) False AMCG00020685
TU81300 other downstream 722583 29381315 ~ 29405636 (-) True G65000
TU81155 other downstream 1331263 28788580 ~ 28796956 (-) True G64882
TU81116 other downstream 1799907 28325307 ~ 28328312 (-) False AMCG00020661
TU81066 other downstream 1898572 28226535 ~ 28229647 (-) True G64811
TU81356 other upstream 377459 30522986 ~ 30531136 (-) True AMCG00020694
TU81423 other upstream 657707 30803234 ~ 30808846 (-) False AMCG00020702
TU81960 other upstream 2215708 32361235 ~ 32365142 (-) True G65549
TU82051 other upstream 2462335 32607862 ~ 32610695 (-) True AMCG00020774
TU82083 other upstream 2509607 32655134 ~ 32657019 (-) True G65641

Expression Profile