RNA id: AMCG00020811


Basic Information

Item Value
RNA id AMCG00020811
length 1353
RNA type mRNA
GC content 0.66
exon number 3
gene id AMCG00020811
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34208909 ~ 34211086 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGTGCCGCCTCTTGGTCCTGCTGTCTTCGCTGTTCATGTCCCACTGGGGGGTCGGCTCTGTCCGCTCCGAGCGCATCCCGTTACCGGGCACCGTGGAGCCCACAAGCGACACCCAGCACAGGGGGTCTCCAGAGCAGCTCGGCCACACAGAAGAGGTGGCACCCGACCCTGCGGAGGCCATGGCGGCGGGCAGTGGACATCAGGCTCCGTACCAGGGCCAGCGGTACCCGCTCTACATGATGCAGCTGTACCGCTCCCTTGCGGCCGGGGACGGCGCACCGGCCAGCGCTCCCACCGAGGTGGACAACCTGGCTCTGCAGGAGTCCGACTCCGTGATGAGTCTCATGGCCAAAAGCTGCTACCAGGAAGGAGACAAGTGGACCGTGACCTTCGACATGTCCTCCATCTCGGCCAGCGACGAGGTGCGTCTGTCTGAGCTGCGGTTCAGGCTGCCCTCCTTCTCCGGCTCCAACCGCGTGACCGTGGAGATCTTCCACTCCGGGGAGGGCCCCTGCCCCCCCAGCAGCCCCTCCGAGGCCTGCCAGGAGAGCCTCTTCCTGGGCAGCTTCAGCGCCACTCCGGCCGACACATCATCCTCCTGGAAGGTGTTCAACATCACCGACCTGCTGAAGTACTGGCTGCACCAGGCCCACGGGCAGAGCTTCCCCGGAGGCAGGGAGGGCAGCGAGGAGCCCCGTGGGGAGCAGGAGGAGGGCAGCGAGGAGGCGGCCCAGCAGAGGCAGAGGCACATGCTGAAACACCAGGGCTCCAGCGACGGGCAGTGGCACAGCACCACGGACCAGGTCATGATGGTAGTCTTTTCCAAGCACAACCAGACAGGTGTGGCCGTGGGCGCCCCCACCCTCATCCACACCGTGGAGCACTCCAAGTACGTCATCCTGGAGCGCGGCCCAGCTGGAGACATGGCTGTCCGCCGGCACAGGAGGAACCGGATCGAGCGGGAGAGGGTGAAGCTGGCGGGTGGCGGAGGGCCCACTGCCCCTGCCCCTGAGGCCGCCGCCGCTGCCGCCACACGCCCACTCTGCAGAAAGGTGGACATGTGGGTGGACTTCGACCAGATTGGCTGGAAAGACTGGATCGTCTACCCCAAGCGCTACAACGCCTTCCGCTGCGAGGGGGACTGCCCCAGCCCCGTGGACGAGTCCTTCAACCCCACCAACCATGCCTACATGCAGAGCCTGCTGAAGCTGTACCAGCCCGACCGGGTGTCGTGCCCGTCCTGCGTGCCCACGCGGCTCAGCCCGCTGTCCATGCTGTACTACGAGAACGAGGAGGTGGTCCTGCGTCACCATGAGGACATGATTGTGGAGGAGTGCGGCTGCCACTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU82340 lncRNA downstream 91966 34116606 ~ 34116943 (-) True G65858
TU82325 lncRNA downstream 155801 34052460 ~ 34053108 (-) True G65845
TU82324 lncRNA downstream 157840 34049996 ~ 34051069 (-) True G65844
TU82289 lncRNA downstream 226883 33981790 ~ 33982026 (-) True G65815
TU82287 lncRNA downstream 246718 33961177 ~ 33962191 (-) True G65813
TU82349 lncRNA upstream 3971 34215057 ~ 34215559 (-) True G65867
TU82355 lncRNA upstream 7673 34218759 ~ 34220010 (-) True G65872
TU82420 lncRNA upstream 205571 34416657 ~ 34420190 (-) True G65915
TU82465 lncRNA upstream 303282 34514368 ~ 34515898 (-) True G65957
TU82523 lncRNA upstream 535855 34746941 ~ 34747361 (-) True G66001
AMCG00020807 mRNA downstream 95220 34112643 ~ 34113689 (-) True AMCG00020807
AMCG00020803 mRNA downstream 133305 34056954 ~ 34075604 (-) True AMCG00020803
AMCG00020805 mRNA downstream 181347 34023019 ~ 34027562 (-) True AMCG00020805
AMCG00020804 mRNA downstream 213184 33992809 ~ 33995725 (-) True AMCG00020804
AMCG00020798 mRNA downstream 285474 33915581 ~ 33923435 (-) True AMCG00020798
AMCG00020813 mRNA upstream 5810 34216896 ~ 34220680 (-) True AMCG00020813
AMCG00020810 mRNA upstream 11260 34222346 ~ 34230487 (-) True AMCG00020810
AMCG00020812 mRNA upstream 28803 34239889 ~ 34272166 (-) True AMCG00020812
AMCG00020815 mRNA upstream 78901 34289987 ~ 34314712 (-) True AMCG00020815
AMCG00020821 mRNA upstream 222339 34433425 ~ 34441728 (-) True AMCG00020821
TU82216 other downstream 839804 33368625 ~ 33369105 (-) True G65756
TU82127 other downstream 1317416 32886364 ~ 32891493 (-) True G65679
TU82083 other downstream 1551890 32655134 ~ 32657019 (-) True G65641
TU82051 other downstream 1598214 32607862 ~ 32610695 (-) True AMCG00020774
TU81960 other downstream 1843767 32361235 ~ 32365142 (-) True G65549
TU82397 other upstream 11229 34222315 ~ 34239697 (-) False AMCG00020810
TU82568 other upstream 597688 34808774 ~ 34814169 (-) False AMCG00020836
TU82585 other upstream 651533 34862619 ~ 34865305 (-) True G66054
TU82718 other upstream 938482 35149568 ~ 35170179 (-) False AMCG00020853
TU82719 other upstream 951728 35162814 ~ 35170179 (-) True AMCG00020853

Expression Profile