RNA id: AMCG00020911


Basic Information

Item Value
RNA id AMCG00020911
length 1581
RNA type mRNA
GC content 0.51
exon number 17
gene id AMCG00020911
representative False

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 36260993 ~ 36282529 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atggagCACAAGCAAAAGGTTATGTGGCAGGATATCTTACAGCAAGGTTTTGTAGAGAGTTCCCCTTCCAGTGTGCCCAAAACGATGCCCATCTTCAACCCTCTACAATGGCTGAAAGAGGGCAGGGAGTCTCGGAGGCTGGTGCTGGTGGTGGTTTGCGTGGCTCTCCTGCTGGACAACATGCTCCTCACAGTCGTGGTGCCCATAATCCCCAGCTTCCTGTATGCCACGGAGTTCAAGACGCTGGAGCTCATCCCAAACCAGACCTCTCCTCCCACACCACAGGCCTCCACAGTCCCAGCCTTTTCTTCAGTCTTCTCCTTGTACGACAACGTGACCTACATCCCCACAGACTCCACAGCAAACGCATCAGCCCTCGTCACCAGCAAGGCTTTCAACGACTCAACCACCCAGATGGAGACCGCGATCCCCGCGAGCCACAACAGCTGCGTGAAGAATAGCCATTTCCTGGAGGAAGAAAACGTGCGTGTCGGCCTTCTGTTTGCCTCCAAAGCTTTAGTGCAGCTGCTGGTTAACCCCTTTGTGGGTCCCCTAACCAACAGGATCGGATACCACATCCCAATGTTTGCTGGCTTCATCATCATGTTTGTGTCAACAATATTATTCGCCTTCTCAGGGACGTATGCCTTATTGCTTGTGGCTCGGGCTCTTCAGGGAATTGGctcctctttctcctctgtGGCAGGTCTGGGGATGCTGGCCAGTGTTTATACAGATGACAATGAACGAGGATTCGCCATGGGGATAGCTCTGGGGGGGCTAGCAATGGGCATCCTTATCGGAGCCCCTTTTGGCAGTGTGATGTATGAGTTTGTTGGAAAGAGCGCCCCCTTCCTCATTTTGGCCTTCCTGGCTCTGTTTGATGGCGCCCTGCAGCTATGTATACTCCAGCCGTCAAAGATTTCTCCGGGGAGTGTGGAAGGCACACCTTTGCTAACCCTGTTACGAGACCCCTATATACTTATAACTGCAGGTTCCCTGTGTTTTGCCAATATGGGGGTGGCTATGCTGGAGCCCACCCTCCCGATATGGATGATGCAAACCATTATCTCCTACCTCATCGGCACAAACTTGTTTGGTTTCCTTGCTAACAAAATGGGCAGGTGGTTGTGTTCCATGATTGGCATGATGATAGTTGGAATCAGCCTGCTGTGTGTCCCTtttgccaaaaatatatatgggcTCATTGGTCCTAATGGTGGTCTTGGGTTTGCAATTGGTAAAACTGGGGGTTTCACCTCTTTAAAAGGaacctctgtgtctctgtctccggCAGGAATGGTTGACTCTTCAATGATGCCAATTATGGGGTACCTGGTGGACATTCGCCATGCCTCGGTCTATGGCAGTGTTTATGCCATTGCTGATGTGGCTTTCTGCATGGGATTTGCAATCGGCCCGTCGACTGGAGGAGCCATTGTGAAAGCTATAGGCTTCCCCTATCTCATGGCTATCATCAACCAGGAGTGCCCCATGCACGTCAAAAGCTACAACACTCAGAAGATGCACCGCGAGTTTCCCCTGAGCGATCTGAGCGATGAAGAGGAATCTGAAGAGTGA

Function

GO:

id name namespace
GO:0015893 drug transport biological_process
GO:0055085 transmembrane transport biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU83143 lncRNA downstream 24066 36235772 ~ 36236927 (-) True G66499
TU83061 lncRNA downstream 274297 35975764 ~ 35986696 (-) True AMCG00020900
TU83045 lncRNA downstream 323735 35926538 ~ 35937258 (-) True G66416
TU82933 lncRNA downstream 489307 35771484 ~ 35771686 (-) True G66327
TU82885 lncRNA downstream 557920 35702763 ~ 35703073 (-) True G66284
TU83176 lncRNA upstream 464986 36747515 ~ 36747743 (-) True G66527
TU83184 lncRNA upstream 568541 36851070 ~ 36851636 (-) True G66535
TU83185 lncRNA upstream 586888 36869417 ~ 36870155 (-) True G66536
TU83275 lncRNA upstream 731452 37013981 ~ 37019796 (-) True G66613
TU83352 lncRNA upstream 985253 37267782 ~ 37268223 (-) True G66685
AMCG00020912 mRNA downstream 4483 36246583 ~ 36256510 (-) True AMCG00020912
AMCG00020903 mRNA downstream 82732 36175349 ~ 36178261 (-) True AMCG00020903
AMCG00020905 mRNA downstream 117900 36128362 ~ 36143093 (-) True AMCG00020905
AMCG00020906 mRNA downstream 143299 36114629 ~ 36117694 (-) True AMCG00020906
AMCG00020904 mRNA downstream 160100 36090541 ~ 36100893 (-) True AMCG00020904
AMCG00020913 mRNA upstream 2353 36284882 ~ 36326829 (-) True AMCG00020913
AMCG00020915 mRNA upstream 589805 36872334 ~ 36874433 (-) True AMCG00020915
AMCG00020917 mRNA upstream 594946 36877475 ~ 36894127 (-) True AMCG00020917
AMCG00020918 mRNA upstream 626630 36909159 ~ 36913434 (-) True AMCG00020918
AMCG00020916 mRNA upstream 631958 36914487 ~ 36931628 (-) True AMCG00020916
TU83060 other downstream 274297 35975764 ~ 35986696 (-) False AMCG00020900
TU82986 other downstream 441163 35813969 ~ 35819830 (-) True AMCG00020887
TU82875 other downstream 576438 35679432 ~ 35684555 (-) True G66279
TU82718 other downstream 1090814 35149568 ~ 35170179 (-) False AMCG00020853
TU83279 other upstream 757918 37040447 ~ 37045939 (-) False AMCG00020923
TU83289 other upstream 782634 37065163 ~ 37067792 (-) False AMCG00020922
TU83462 other upstream 1349271 37631800 ~ 37632576 (-) True AMCG00020943
TU83728 other upstream 2767687 39050216 ~ 39104867 (-) False AMCG00020970
TU84154 other upstream 5317872 41600401 ~ 41602270 (-) False AMCG00021012

Expression Profile