RNA id: AMCG00020912


Basic Information

Item Value
RNA id AMCG00020912
length 1512
RNA type mRNA
GC content 0.58
exon number 8
gene id AMCG00020912
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 36246583 ~ 36256510 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCGCTCTTTGTTTCTCGGCGCAGGCGGAACTATTTTGGTGTTGCGCCGGCAAAGGCGTGTTTTGTGCTGTGGCTGGAGAGGGAAACCAAACATGTAATCTGGTCAGTTACAGCCATCAAATACAACCAGCCAAGCAACACAGCAGTTTCTTCAATCATGGATCTGACTGGCATTCTGTGCAGCCCTGGGGAAGCCCCCTCCCTGTCTGTGGTGAAGGTCCTCTCCCAGATCCAGGACTTATTCCAAGTGGAGAGCTGCCCGCAAACCAAGGAGGCCATCTTACAGAGCACACAGCACCTGCTCGAAACGGGAGACTGTCACTGGCTGTTCTCTGACTGCTGTGCCAACCAGGATACCAATATAAGGGCGCTATACCTCGACTTCACCAGCACCCTCATCCACTACGCAGCTCTCCCGCTCTGCGACACGGACAGTGGAGAACTGCCCCCCGGCTCGTACGCAGGGATCCCAGAGAAGATGTGCCTCGTCAACCGAGTCTTCCTCTCCCTGCTGAGGCGGCTCGAGGCGGATAAGGGTTTCGTGCCCTGCGACAGGGCAGCCGCTCCTGTGAGAGCTCTGGCCCACAAAGTGACGCcccttctgtttgtgtttgcgCTGACCCATTCACAAGACTGGCCGTGGACGAGCTCACAGTCGAAGCAAGAGGCTGCAGAGCTTTTAAACTGCATGATCCGGGCTGCGGGGTGCACGTCTGCCACGGAGCTGCTGTGTGGGCAAGATGGAGGCACCGACGTCGGGATTTTAGGGCCAGTCCTGGAAATATTGAAACCTGATTTGAAAAAGGAGCGCTGGAAGCGAAACGAGGCCACAAAGCACGTCTTCTCCTGGACGCTCACCCAGGTGGGCCGGCCCTGGCTGGTGGAGTTCTTGGACTGcgttttccccccctctctgctCATCTCGGATGACTACCGCACTGAAAATAAGGTCCTCGGGGTGCACTGTCTGCGTCATATCATCCACACTGTGGTGGTCCTGCCCTGCTTGTTAGACGTGCTCTCAGTGCTGGAAAAGCCCCCAGAAAACAGGACGGCCCCCCGAAAATCTAATCGGTATGATGTGGTCCTGAGACTGGTCctcacacaaatggaaatggagCACAAGATCCCTCTGCGCAGGGTTTATGCAAGAAACCTACCTCTCTTCATTGCAAGACTCGGTGTTGTGACGGTGCGCCACCTGAAGAGGTTGGAGCGGGTGATTGTGGGATACCTGGAGGTTTATGATGGACCAGACGAAGAAGCCAGACTGATGGGCAGCAGGCTGTCCGTGCTGCTGCAGGCATTGCTGAGACTGCTGTGTGACGTGTGCGCAGACCCCGGCCCCACGGCCCCCGCGGTGCAAGAGGAGCTGCTGCGGAGGGCCACGCACTGCCTCACCCTGCTGGACCACTGCTGCCAGGGCCGAGTGACGGTCTGGATGGCAAACTGTCCCCAAACCGGCACGTTGTCGGGAGCTGTGGAGTCCAGGGTGTCAGGGTACGGGgggtag

Function

GO: NA

KEGG:

id description
K23115 TTI2; TELO2-interacting protein 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU83143 lncRNA downstream 9656 36235772 ~ 36236927 (-) True G66499
TU83061 lncRNA downstream 259887 35975764 ~ 35986696 (-) True AMCG00020900
TU83045 lncRNA downstream 309325 35926538 ~ 35937258 (-) True G66416
TU82933 lncRNA downstream 474897 35771484 ~ 35771686 (-) True G66327
TU82885 lncRNA downstream 543510 35702763 ~ 35703073 (-) True G66284
TU83158 lncRNA upstream 21640 36278150 ~ 36282527 (-) True AMCG00020911
TU83176 lncRNA upstream 491005 36747515 ~ 36747743 (-) True G66527
TU83184 lncRNA upstream 594560 36851070 ~ 36851636 (-) True G66535
TU83185 lncRNA upstream 612907 36869417 ~ 36870155 (-) True G66536
TU83275 lncRNA upstream 757471 37013981 ~ 37019796 (-) True G66613
AMCG00020903 mRNA downstream 68322 36175349 ~ 36178261 (-) True AMCG00020903
AMCG00020905 mRNA downstream 103490 36128362 ~ 36143093 (-) True AMCG00020905
AMCG00020906 mRNA downstream 128889 36114629 ~ 36117694 (-) True AMCG00020906
AMCG00020904 mRNA downstream 145690 36090541 ~ 36100893 (-) True AMCG00020904
AMCG00020898 mRNA downstream 180510 36041859 ~ 36066073 (-) True AMCG00020898
AMCG00020911 mRNA upstream 4483 36260993 ~ 36282529 (-) False AMCG00020911
AMCG00020913 mRNA upstream 28372 36284882 ~ 36326829 (-) True AMCG00020913
AMCG00020915 mRNA upstream 615824 36872334 ~ 36874433 (-) True AMCG00020915
AMCG00020917 mRNA upstream 620965 36877475 ~ 36894127 (-) True AMCG00020917
AMCG00020918 mRNA upstream 652649 36909159 ~ 36913434 (-) True AMCG00020918
TU83060 other downstream 259887 35975764 ~ 35986696 (-) False AMCG00020900
TU82986 other downstream 426753 35813969 ~ 35819830 (-) True AMCG00020887
TU82875 other downstream 562028 35679432 ~ 35684555 (-) True G66279
TU82718 other downstream 1076404 35149568 ~ 35170179 (-) False AMCG00020853
TU83279 other upstream 783937 37040447 ~ 37045939 (-) False AMCG00020923
TU83289 other upstream 808653 37065163 ~ 37067792 (-) False AMCG00020922
TU83462 other upstream 1375290 37631800 ~ 37632576 (-) True AMCG00020943
TU83728 other upstream 2793706 39050216 ~ 39104867 (-) False AMCG00020970
TU84154 other upstream 5343891 41600401 ~ 41602270 (-) False AMCG00021012

Expression Profile